Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Hmgb1P63158 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Hmgb1P63158 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Hmgb1P63158 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Hmgb1P63158 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Hmgb1P63158 Igkv4-72-201ENSMUST00000103346 402 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Hmgb1P63158 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Hmgb1P63158 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Hmgb1P63158 Fau-ps2-201ENSMUST00000119333 371 ntBASIC8.47□□□□□ -1.05
Hmgb1P63158 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Hmgb1P63158 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC8.47□□□□□ -1.05
Hmgb1P63158 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Hmgb1P63158 Apela-202ENSMUST00000142822 975 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Hmgb1P63158 Gm14642-201ENSMUST00000147357 470 ntTSL 3 BASIC8.47□□□□□ -1.05
Hmgb1P63158 Gm23897-201ENSMUST00000158110 158 ntBASIC8.47□□□□□ -1.05
Hmgb1P63158 Gm24347-201ENSMUST00000158711 142 ntBASIC8.47□□□□□ -1.05
Hmgb1P63158 Gm18970-201ENSMUST00000186040 938 ntBASIC8.47□□□□□ -1.05
Hmgb1P63158 Gm28609-201ENSMUST00000186515 463 ntTSL 3 BASIC8.47□□□□□ -1.05
Hmgb1P63158 Gm28983-201ENSMUST00000186685 614 ntBASIC8.47□□□□□ -1.05
Hmgb1P63158 Gm28150-201ENSMUST00000187305 614 ntBASIC8.47□□□□□ -1.05
Hmgb1P63158 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC8.47□□□□□ -1.05
Hmgb1P63158 Gm28377-201ENSMUST00000189695 720 ntBASIC8.47□□□□□ -1.05
Hmgb1P63158 Gm7369-201ENSMUST00000192738 936 ntBASIC8.47□□□□□ -1.05
Hmgb1P63158 Gm37108-201ENSMUST00000194605 626 ntBASIC8.47□□□□□ -1.05
Hmgb1P63158 Gm27680-202ENSMUST00000199221 807 ntBASIC8.47□□□□□ -1.05
Hmgb1P63158 Gm7879-202ENSMUST00000200338 635 ntTSL 5 BASIC8.47□□□□□ -1.05
Hmgb1P63158 Gm44306-201ENSMUST00000203058 203 ntBASIC8.47□□□□□ -1.05
Hmgb1P63158 Yipf7-201ENSMUST00000031045 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Hmgb1P63158 Olfr698-201ENSMUST00000074981 936 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Hmgb1P63158 Gm9761-201ENSMUST00000075650 492 ntBASIC8.47□□□□□ -1.05
Hmgb1P63158 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Hmgb1P63158 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Hmgb1P63158 Gm44117-201ENSMUST00000204442 1758 ntBASIC8.47□□□□□ -1.05
Hmgb1P63158 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Hmgb1P63158 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC8.47□□□□□ -1.05
Hmgb1P63158 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Hmgb1P63158 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Hmgb1P63158 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Hmgb1P63158 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Hmgb1P63158 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Hmgb1P63158 Gm6819-201ENSMUST00000185325 1891 ntBASIC8.47□□□□□ -1.05
Hmgb1P63158 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Hmgb1P63158 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Hmgb1P63158 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Hmgb1P63158 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Hmgb1P63158 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Hmgb1P63158 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Hmgb1P63158 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Hmgb1P63158 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Hmgb1P63158 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC8.46□□□□□ -1.05
Hmgb1P63158 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Hmgb1P63158 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC8.46□□□□□ -1.05
Hmgb1P63158 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Hmgb1P63158 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Hmgb1P63158 Gm43533-201ENSMUST00000202933 2936 ntBASIC8.46□□□□□ -1.06
Hmgb1P63158 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Hmgb1P63158 Igkv6-29-201ENSMUST00000103379 344 ntAPPRIS ALT2 BASIC8.46□□□□□ -1.06
Hmgb1P63158 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Hmgb1P63158 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Hmgb1P63158 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC8.46□□□□□ -1.06
Hmgb1P63158 Dtwd1-201ENSMUST00000110437 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Hmgb1P63158 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Hmgb1P63158 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC8.46□□□□□ -1.06
Hmgb1P63158 Gm5228-201ENSMUST00000117186 357 ntBASIC8.46□□□□□ -1.06
Hmgb1P63158 Gm13458-201ENSMUST00000118239 367 ntBASIC8.46□□□□□ -1.06
Hmgb1P63158 Gm14826-201ENSMUST00000121284 901 ntBASIC8.46□□□□□ -1.06
Hmgb1P63158 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Hmgb1P63158 Gm13269-201ENSMUST00000143458 655 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Hmgb1P63158 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC8.46□□□□□ -1.06
Hmgb1P63158 Gm22424-201ENSMUST00000158527 87 ntBASIC8.46□□□□□ -1.06
Hmgb1P63158 Gm24899-201ENSMUST00000158892 73 ntBASIC8.46□□□□□ -1.06
Hmgb1P63158 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC8.46□□□□□ -1.06
Hmgb1P63158 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC8.46□□□□□ -1.06
Hmgb1P63158 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC8.46□□□□□ -1.06
Hmgb1P63158 Gm8307-201ENSMUST00000187682 1150 ntBASIC8.46□□□□□ -1.06
Hmgb1P63158 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC8.46□□□□□ -1.06
Hmgb1P63158 Gm8480-201ENSMUST00000190350 698 ntBASIC8.46□□□□□ -1.06
Hmgb1P63158 Gm17835-201ENSMUST00000196870 499 ntBASIC8.46□□□□□ -1.06
Hmgb1P63158 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC8.46□□□□□ -1.06
Hmgb1P63158 Gm4259-201ENSMUST00000206489 758 ntBASIC8.46□□□□□ -1.06
Hmgb1P63158 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC8.46□□□□□ -1.06
Hmgb1P63158 Gm4275-203ENSMUST00000210214 1298 ntTSL 5 BASIC8.46□□□□□ -1.06
Hmgb1P63158 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC8.46□□□□□ -1.06
Hmgb1P63158 Gm34006-201ENSMUST00000213985 655 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Hmgb1P63158 AC132384.10-201ENSMUST00000217862 1204 ntBASIC8.46□□□□□ -1.06
Hmgb1P63158 Gm46317-201ENSMUST00000221103 393 ntBASIC8.46□□□□□ -1.06
Hmgb1P63158 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Hmgb1P63158 Gm7086-202ENSMUST00000228849 506 ntBASIC8.46□□□□□ -1.06
Hmgb1P63158 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Hmgb1P63158 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Hmgb1P63158 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Hmgb1P63158 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Hmgb1P63158 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Hmgb1P63158 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Hmgb1P63158 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Hmgb1P63158 Gm42771-201ENSMUST00000198342 2486 ntBASIC8.46□□□□□ -1.06
Hmgb1P63158 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC8.46□□□□□ -1.06
Hmgb1P63158 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Hmgb1P63158 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
Hmgb1P63158 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms