Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd1P40201 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC10.9□□□□□ -0.66
Chd1P40201 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd1P40201 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC10.9□□□□□ -0.66
Chd1P40201 Gm25363-201ENSMUST00000158850 245 ntBASIC10.9□□□□□ -0.66
Chd1P40201 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd1P40201 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC10.9□□□□□ -0.66
Chd1P40201 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chd1P40201 Gm35108-201ENSMUST00000194321 699 ntBASIC10.9□□□□□ -0.66
Chd1P40201 Gm33191-201ENSMUST00000195604 699 ntBASIC10.9□□□□□ -0.66
Chd1P40201 Gm43850-201ENSMUST00000202021 578 ntBASIC10.9□□□□□ -0.66
Chd1P40201 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC10.9□□□□□ -0.66
Chd1P40201 Gm44565-201ENSMUST00000208194 269 ntBASIC10.9□□□□□ -0.66
Chd1P40201 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC10.9□□□□□ -0.66
Chd1P40201 Gm7252-201ENSMUST00000223284 456 ntBASIC10.9□□□□□ -0.66
Chd1P40201 AV026068-216ENSMUST00000223874 328 ntBASIC10.9□□□□□ -0.66
Chd1P40201 AV026068-218ENSMUST00000223980 575 ntBASIC10.9□□□□□ -0.66
Chd1P40201 AC122290.1-201ENSMUST00000225631 1078 ntBASIC10.9□□□□□ -0.66
Chd1P40201 AW822073-201ENSMUST00000075305 555 ntBASIC10.9□□□□□ -0.66
Chd1P40201 AC111010.1-203ENSMUST00000227287 1548 ntBASIC10.9□□□□□ -0.66
Chd1P40201 Mbnl3-201ENSMUST00000041495 1803 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chd1P40201 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Chd1P40201 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd1P40201 Sox5-205ENSMUST00000111749 3879 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chd1P40201 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd1P40201 Flii-201ENSMUST00000002889 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd1P40201 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Chd1P40201 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chd1P40201 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd1P40201 Pex5l-208ENSMUST00000192093 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd1P40201 Gm43789-201ENSMUST00000199275 2472 ntBASIC10.9□□□□□ -0.66
Chd1P40201 Ndrg3-203ENSMUST00000109558 4023 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Chd1P40201 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Chd1P40201 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Chd1P40201 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Chd1P40201 Pde6h-202ENSMUST00000137768 5940 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Chd1P40201 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC10.89□□□□□ -0.67
Chd1P40201 Gm26346-201ENSMUST00000157525 329 ntBASIC10.89□□□□□ -0.67
Chd1P40201 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chd1P40201 Gm18995-201ENSMUST00000202981 520 ntBASIC10.89□□□□□ -0.67
Chd1P40201 Gm45448-201ENSMUST00000211739 209 ntBASIC10.89□□□□□ -0.67
Chd1P40201 AC126554.3-201ENSMUST00000223131 493 ntBASIC10.89□□□□□ -0.67
Chd1P40201 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chd1P40201 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd1P40201 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd1P40201 Gm12608-201ENSMUST00000122013 1715 ntBASIC10.89□□□□□ -0.67
Chd1P40201 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC10.89□□□□□ -0.67
Chd1P40201 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Chd1P40201 Gm43430-201ENSMUST00000196513 3897 ntBASIC10.89□□□□□ -0.67
Chd1P40201 Gm43864-201ENSMUST00000204452 4028 ntBASIC10.89□□□□□ -0.67
Chd1P40201 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Chd1P40201 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chd1P40201 Akap8-201ENSMUST00000002699 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd1P40201 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC10.89□□□□□ -0.67
Chd1P40201 Gm12183-201ENSMUST00000120566 1848 ntBASIC10.89□□□□□ -0.67
Chd1P40201 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Chd1P40201 Rngtt-202ENSMUST00000108153 4157 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd1P40201 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Chd1P40201 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd1P40201 Gm27507-201ENSMUST00000184199 93 ntBASIC10.89□□□□□ -0.67
Chd1P40201 AC154558.1-201ENSMUST00000222278 415 ntBASIC10.89□□□□□ -0.67
Chd1P40201 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Chd1P40201 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC10.89□□□□□ -0.67
Chd1P40201 Tpd52l2-204ENSMUST00000108800 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd1P40201 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd1P40201 Gm38339-201ENSMUST00000195479 1829 ntBASIC10.89□□□□□ -0.67
Chd1P40201 Lmx1a-202ENSMUST00000111377 3200 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Chd1P40201 Ston1-205ENSMUST00000150023 3231 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Chd1P40201 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd1P40201 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd1P40201 Zfp462-201ENSMUST00000030131 4823 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Chd1P40201 Psg16-201ENSMUST00000071399 4421 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd1P40201 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Chd1P40201 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Chd1P40201 Timeless-205ENSMUST00000105244 4341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd1P40201 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd1P40201 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd1P40201 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Chd1P40201 Rgs4-202ENSMUST00000111357 2575 ntTSL 5 BASIC10.88□□□□□ -0.67
Chd1P40201 Cdc6-202ENSMUST00000093937 2559 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd1P40201 Rbm25-201ENSMUST00000048155 4226 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Chd1P40201 Nos1-207ENSMUST00000171055 4388 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd1P40201 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Chd1P40201 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Chd1P40201 Gm12135-201ENSMUST00000119170 466 ntBASIC10.88□□□□□ -0.67
Chd1P40201 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Chd1P40201 Gm8582-201ENSMUST00000164061 789 ntBASIC10.88□□□□□ -0.67
Chd1P40201 Mir3097-201ENSMUST00000175356 67 ntBASIC10.88□□□□□ -0.67
Chd1P40201 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC10.88□□□□□ -0.67
Chd1P40201 Gm27601-201ENSMUST00000184794 127 ntBASIC10.88□□□□□ -0.67
Chd1P40201 Gm18700-201ENSMUST00000185791 553 ntBASIC10.88□□□□□ -0.67
Chd1P40201 Gm44795-201ENSMUST00000205496 319 ntBASIC10.88□□□□□ -0.67
Chd1P40201 AC164436.1-201ENSMUST00000227074 772 ntBASIC10.88□□□□□ -0.67
Chd1P40201 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Chd1P40201 Sepsecs-201ENSMUST00000031069 5252 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd1P40201 Rapgef6-203ENSMUST00000102743 8189 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Chd1P40201 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd1P40201 Gm6614-201ENSMUST00000111832 1953 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Chd1P40201 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chd1P40201 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms