Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Traf1P39428 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Traf1P39428 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Traf1P39428 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Traf1P39428 Gm42973-201ENSMUST00000197913 3200 ntBASIC8.67□□□□□ -1.02
Traf1P39428 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Traf1P39428 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Traf1P39428 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC8.67□□□□□ -1.02
Traf1P39428 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC8.67□□□□□ -1.02
Traf1P39428 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Traf1P39428 Gm37510-201ENSMUST00000194151 4762 ntBASIC8.66□□□□□ -1.02
Traf1P39428 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Traf1P39428 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Traf1P39428 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Traf1P39428 Gm43113-201ENSMUST00000199713 1754 ntBASIC8.66□□□□□ -1.02
Traf1P39428 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Traf1P39428 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Traf1P39428 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Traf1P39428 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC8.66□□□□□ -1.02
Traf1P39428 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Traf1P39428 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Traf1P39428 Gm44165-201ENSMUST00000203093 1469 ntBASIC8.66□□□□□ -1.02
Traf1P39428 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC8.66□□□□□ -1.02
Traf1P39428 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Traf1P39428 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Traf1P39428 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Traf1P39428 Gm10623-201ENSMUST00000209081 2639 ntBASIC8.66□□□□□ -1.02
Traf1P39428 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Traf1P39428 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
Traf1P39428 Gm15153-201ENSMUST00000119867 274 ntBASIC8.66□□□□□ -1.02
Traf1P39428 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Traf1P39428 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Traf1P39428 Gm8046-201ENSMUST00000172151 616 ntBASIC8.66□□□□□ -1.02
Traf1P39428 Gm6489-201ENSMUST00000178167 696 ntBASIC8.66□□□□□ -1.02
Traf1P39428 Gm28428-201ENSMUST00000188886 697 ntBASIC8.66□□□□□ -1.02
Traf1P39428 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Traf1P39428 Gm37225-201ENSMUST00000193423 325 ntBASIC8.66□□□□□ -1.02
Traf1P39428 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC8.66□□□□□ -1.02
Traf1P39428 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC8.66□□□□□ -1.02
Traf1P39428 Gm29759-201ENSMUST00000205860 327 ntBASIC8.66□□□□□ -1.02
Traf1P39428 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Traf1P39428 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC8.66□□□□□ -1.02
Traf1P39428 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Traf1P39428 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Traf1P39428 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC8.66□□□□□ -1.02
Traf1P39428 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC8.66□□□□□ -1.02
Traf1P39428 AC140451.1-201ENSMUST00000227984 737 ntBASIC8.66□□□□□ -1.02
Traf1P39428 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC8.66□□□□□ -1.02
Traf1P39428 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Traf1P39428 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC8.66□□□□□ -1.02
Traf1P39428 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC8.66□□□□□ -1.02
Traf1P39428 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC8.66□□□□□ -1.02
Traf1P39428 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Traf1P39428 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC8.66□□□□□ -1.02
Traf1P39428 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Traf1P39428 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Traf1P39428 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Traf1P39428 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Traf1P39428 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC8.66□□□□□ -1.02
Traf1P39428 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC8.66□□□□□ -1.02
Traf1P39428 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Traf1P39428 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Traf1P39428 Gm10743-201ENSMUST00000219611 2358 ntBASIC8.65□□□□□ -1.02
Traf1P39428 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Traf1P39428 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC8.65□□□□□ -1.02
Traf1P39428 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.02
Traf1P39428 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
Traf1P39428 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Traf1P39428 Gm18305-201ENSMUST00000216532 2128 ntBASIC8.65□□□□□ -1.02
Traf1P39428 Gm7265-201ENSMUST00000192735 3502 ntBASIC8.65□□□□□ -1.02
Traf1P39428 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Traf1P39428 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Traf1P39428 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Traf1P39428 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Traf1P39428 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Traf1P39428 Gm25631-201ENSMUST00000104390 130 ntBASIC8.65□□□□□ -1.02
Traf1P39428 Gm24139-201ENSMUST00000122780 288 ntBASIC8.65□□□□□ -1.02
Traf1P39428 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC8.65□□□□□ -1.02
Traf1P39428 Gm16580-201ENSMUST00000162696 1044 ntBASIC8.65□□□□□ -1.02
Traf1P39428 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Traf1P39428 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC8.65□□□□□ -1.02
Traf1P39428 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC8.65□□□□□ -1.02
Traf1P39428 Gm24824-201ENSMUST00000175097 78 ntBASIC8.65□□□□□ -1.02
Traf1P39428 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Traf1P39428 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Traf1P39428 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC8.65□□□□□ -1.02
Traf1P39428 Gm43387-201ENSMUST00000196896 1066 ntBASIC8.65□□□□□ -1.02
Traf1P39428 Gm2505-201ENSMUST00000200413 825 ntBASIC8.65□□□□□ -1.02
Traf1P39428 Gm8921-201ENSMUST00000204306 649 ntBASIC8.65□□□□□ -1.02
Traf1P39428 CT009713.5-201ENSMUST00000224508 909 ntBASIC8.65□□□□□ -1.02
Traf1P39428 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC8.65□□□□□ -1.02
Traf1P39428 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Traf1P39428 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC8.65□□□□□ -1.02
Traf1P39428 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Traf1P39428 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Traf1P39428 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC8.65□□□□□ -1.03
Traf1P39428 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Traf1P39428 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Traf1P39428 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Traf1P39428 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC8.64□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms