Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 AC123705.1-201ENSMUST00000222512 2058 ntBASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Igh-VJ558P01758 AC154522.1-201ENSMUST00000224647 1903 ntBASIC6.37□□□□□ -1.39
Igh-VJ558P01758 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm42568-201ENSMUST00000195639 1841 ntBASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm22439-201ENSMUST00000104048 132 ntBASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm25276-201ENSMUST00000104300 124 ntBASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm8662-201ENSMUST00000118644 574 ntBASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm5759-201ENSMUST00000119203 811 ntBASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm11320-201ENSMUST00000119434 463 ntBASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm11850-201ENSMUST00000119679 479 ntBASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm14787-201ENSMUST00000121236 388 ntBASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm11954-201ENSMUST00000121403 349 ntBASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm14587-201ENSMUST00000121714 658 ntBASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm15644-201ENSMUST00000121764 387 ntBASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm24139-201ENSMUST00000122780 288 ntBASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm20797-201ENSMUST00000177894 383 ntBASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm37729-201ENSMUST00000194761 1172 ntBASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm8077-201ENSMUST00000209221 1024 ntBASIC6.36□□□□□ -1.39
Igh-VJ558P01758 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm45756-201ENSMUST00000212491 407 ntBASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 AC159205.2-201ENSMUST00000223759 816 ntBASIC6.36□□□□□ -1.39
Igh-VJ558P01758 AC154461.4-201ENSMUST00000224878 468 ntBASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm45477-201ENSMUST00000200213 5498 ntBASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Igh-VJ558P01758 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC6.35□□□□□ -1.39
Igh-VJ558P01758 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Igh-VJ558P01758 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Igh-VJ558P01758 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Igh-VJ558P01758 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Igh-VJ558P01758 Gm37548-201ENSMUST00000194519 3814 ntBASIC6.35□□□□□ -1.39
Igh-VJ558P01758 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
Igh-VJ558P01758 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Igh-VJ558P01758 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Igh-VJ558P01758 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Igh-VJ558P01758 CT025639.1-201ENSMUST00000223906 1375 ntBASIC6.35□□□□□ -1.39
Igh-VJ558P01758 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Igh-VJ558P01758 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Igh-VJ558P01758 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC6.35□□□□□ -1.39
Igh-VJ558P01758 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Igh-VJ558P01758 Defa-ps7-201ENSMUST00000117139 168 ntBASIC6.35□□□□□ -1.39
Igh-VJ558P01758 Gm7803-201ENSMUST00000117176 1015 ntBASIC6.35□□□□□ -1.39
Igh-VJ558P01758 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC6.35□□□□□ -1.39
Igh-VJ558P01758 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms