Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm38022-201ENSMUST00000191762 403 ntBASIC7.54□□□□□ -1.2
Col4a6B1AVK5 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC7.54□□□□□ -1.2
Col4a6B1AVK5 Gm5928-201ENSMUST00000221839 466 ntBASIC7.54□□□□□ -1.2
Col4a6B1AVK5 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC7.54□□□□□ -1.2
Col4a6B1AVK5 CT009495.1-201ENSMUST00000224221 862 ntBASIC7.54□□□□□ -1.2
Col4a6B1AVK5 AC163667.1-201ENSMUST00000225201 1289 ntBASIC7.54□□□□□ -1.2
Col4a6B1AVK5 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC7.54□□□□□ -1.2
Col4a6B1AVK5 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Col4a6B1AVK5 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Col4a6B1AVK5 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Cacna1c-220ENSMUST00000189520 6570 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Vps39-201ENSMUST00000028752 4339 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Fgfbp1-202ENSMUST00000199481 2191 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Gm43285-201ENSMUST00000196563 3592 ntBASIC7.53□□□□□ -1.2
Col4a6B1AVK5 2010111I01Rik-202ENSMUST00000091560 3509 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Creb1-202ENSMUST00000087366 8364 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Paqr8-204ENSMUST00000189400 5330 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 AC107763.1-202ENSMUST00000225021 2663 ntBASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Gm11343-201ENSMUST00000120579 599 ntBASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Gm13237-201ENSMUST00000122151 635 ntBASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Gm25969-201ENSMUST00000157166 132 ntBASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Gm22428-201ENSMUST00000158554 132 ntBASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Gm26729-201ENSMUST00000180744 352 ntBASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Mir7653-201ENSMUST00000184358 61 ntBASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Gm28952-201ENSMUST00000189285 681 ntBASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Gm43459-201ENSMUST00000202093 331 ntBASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Gm45185-201ENSMUST00000207556 404 ntBASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Gm4767-202ENSMUST00000188096 4725 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col4a6B1AVK5 Aldh1l1-203ENSMUST00000130418 4175 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Col4a6B1AVK5 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.2
Col4a6B1AVK5 Gm26575-201ENSMUST00000181714 2232 ntBASIC7.52□□□□□ -1.2
Col4a6B1AVK5 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Ambra1-201ENSMUST00000045699 4690 ntTSL 5 BASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
Col4a6B1AVK5 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Col4a6B1AVK5 D5Ertd615e-202ENSMUST00000197016 3911 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Sall1-201ENSMUST00000034090 5265 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC7.52□□□□□ -1.21
Col4a6B1AVK5 AC130831.1-201ENSMUST00000224546 1474 ntBASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Gm22426-201ENSMUST00000103811 96 ntBASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Gm11501-201ENSMUST00000118039 581 ntBASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Gm14729-201ENSMUST00000118373 689 ntBASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Gm24176-201ENSMUST00000158928 121 ntBASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Rps12l1-201ENSMUST00000183090 399 ntBASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Gm7266-201ENSMUST00000187999 405 ntBASIC7.52□□□□□ -1.21
Col4a6B1AVK5 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Gm37439-201ENSMUST00000193150 856 ntBASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Gm38574-201ENSMUST00000211855 640 ntBASIC7.52□□□□□ -1.21
Col4a6B1AVK5 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms