Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Gm45506-201ENSMUST00000211620 280 ntBASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 AC151904.2-201ENSMUST00000218683 1177 ntBASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 CT009546.3-201ENSMUST00000220914 208 ntBASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Gm5815-201ENSMUST00000050706 1185 ntBASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 AC159264.1-201ENSMUST00000224844 4257 ntBASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Gm43429-201ENSMUST00000197889 2251 ntBASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Cd200r4-203ENSMUST00000176819 1796 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Gm15576-201ENSMUST00000117806 583 ntBASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Gm5920-201ENSMUST00000187390 853 ntBASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Gm37783-201ENSMUST00000192025 1856 ntBASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Gm18726-201ENSMUST00000218175 2010 ntBASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 CT009556.3-201ENSMUST00000226173 513 ntBASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 AC154270.2-201ENSMUST00000226755 2306 ntBASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Gm45887-201ENSMUST00000212672 2998 ntBASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Chmp4bQ9D8B3 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Defa-ps7-201ENSMUST00000117139 168 ntBASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Gm11558-201ENSMUST00000118454 459 ntBASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Gm15049-201ENSMUST00000120474 463 ntBASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Mir6403-201ENSMUST00000185007 129 ntBASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Gm43555-201ENSMUST00000196588 310 ntBASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Gm43558-201ENSMUST00000200155 210 ntBASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Gm5154-201ENSMUST00000203971 399 ntBASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Gm44508-201ENSMUST00000206943 1157 ntBASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Gm38218-201ENSMUST00000193555 4689 ntBASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Chmp4bQ9D8B3 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms