Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm12632-201ENSMUST00000121223 495 ntBASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Gm22035-201ENSMUST00000157284 228 ntBASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Gm5973-201ENSMUST00000178542 496 ntBASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Gm28983-201ENSMUST00000186685 614 ntBASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Gm28150-201ENSMUST00000187305 614 ntBASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Gm28377-201ENSMUST00000189695 720 ntBASIC8.35□□□□□ -1.07
Smc1aQ9CU62 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC8.35□□□□□ -1.07
Smc1aQ9CU62 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Gm19056-201ENSMUST00000218220 797 ntBASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Gm18503-201ENSMUST00000220340 728 ntBASIC8.35□□□□□ -1.07
Smc1aQ9CU62 AC116502.1-201ENSMUST00000220989 291 ntBASIC8.35□□□□□ -1.07
Smc1aQ9CU62 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC8.35□□□□□ -1.07
Smc1aQ9CU62 AC130673.1-201ENSMUST00000227992 435 ntBASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Smc1aQ9CU62 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Gm42568-201ENSMUST00000195639 1841 ntBASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC8.35□□□□□ -1.07
Smc1aQ9CU62 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Gm45221-201ENSMUST00000207822 2272 ntBASIC8.34□□□□□ -1.07
Smc1aQ9CU62 AC156645.1-201ENSMUST00000223066 5194 ntBASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Gm44752-201ENSMUST00000207140 3305 ntBASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Kxd1-203ENSMUST00000118850 992 ntTSL 2 BASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Gm9697-201ENSMUST00000147052 997 ntBASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Gm23639-201ENSMUST00000175078 132 ntBASIC8.34□□□□□ -1.07
Smc1aQ9CU62 n-R5s115-201ENSMUST00000179019 119 ntBASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Gm29362-201ENSMUST00000187898 133 ntBASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Gm29214-201ENSMUST00000190216 570 ntBASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Gm37310-201ENSMUST00000195237 2968 ntBASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Gm4605-201ENSMUST00000203148 625 ntBASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Gm4259-201ENSMUST00000206489 758 ntBASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Gm31663-202ENSMUST00000208481 1190 ntBASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Gm7943-201ENSMUST00000212078 1034 ntBASIC8.34□□□□□ -1.07
Smc1aQ9CU62 AC163667.2-201ENSMUST00000223769 791 ntBASIC8.34□□□□□ -1.07
Smc1aQ9CU62 AC165154.2-201ENSMUST00000227310 336 ntBASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Gm2531-201ENSMUST00000075609 512 ntBASIC8.34□□□□□ -1.07
Smc1aQ9CU62 n-R5s193-201ENSMUST00000082864 109 ntBASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Lrrc3b-203ENSMUST00000223700 1426 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Smc1aQ9CU62 AC154806.2-201ENSMUST00000227212 2385 ntBASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Gm37906-201ENSMUST00000192050 3035 ntBASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Smc1aQ9CU62 Gm21043-201ENSMUST00000199316 1517 ntBASIC8.34□□□□□ -1.08
Smc1aQ9CU62 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smc1aQ9CU62 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Smc1aQ9CU62 Psg19-201ENSMUST00000004657 2105 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smc1aQ9CU62 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Smc1aQ9CU62 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
Smc1aQ9CU62 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smc1aQ9CU62 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smc1aQ9CU62 Gm44117-201ENSMUST00000204442 1758 ntBASIC8.33□□□□□ -1.08
Smc1aQ9CU62 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smc1aQ9CU62 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smc1aQ9CU62 AC135119.1-202ENSMUST00000228435 2203 ntBASIC8.33□□□□□ -1.08
Smc1aQ9CU62 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smc1aQ9CU62 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC8.33□□□□□ -1.08
Smc1aQ9CU62 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smc1aQ9CU62 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smc1aQ9CU62 Gm14201-201ENSMUST00000117627 289 ntBASIC8.33□□□□□ -1.08
Smc1aQ9CU62 Gm13038-201ENSMUST00000119886 459 ntBASIC8.33□□□□□ -1.08
Smc1aQ9CU62 Gm22025-201ENSMUST00000122734 302 ntBASIC8.33□□□□□ -1.08
Smc1aQ9CU62 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smc1aQ9CU62 Gm14170-201ENSMUST00000133751 331 ntTSL 3 BASIC8.33□□□□□ -1.08
Smc1aQ9CU62 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smc1aQ9CU62 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smc1aQ9CU62 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC8.33□□□□□ -1.08
Smc1aQ9CU62 Gm8164-201ENSMUST00000169120 1192 ntBASIC8.33□□□□□ -1.08
Smc1aQ9CU62 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC8.33□□□□□ -1.08
Smc1aQ9CU62 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC8.33□□□□□ -1.08
Smc1aQ9CU62 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smc1aQ9CU62 Gm27435-201ENSMUST00000183588 88 ntBASIC8.33□□□□□ -1.08
Smc1aQ9CU62 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC8.33□□□□□ -1.08
Smc1aQ9CU62 Gm18254-201ENSMUST00000185699 1204 ntBASIC8.33□□□□□ -1.08
Smc1aQ9CU62 Gm29273-201ENSMUST00000188880 262 ntBASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms