Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Cst7-201ENSMUST00000089200 986 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trim8Q99PJ2 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Trim8Q99PJ2 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trim8Q99PJ2 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trim8Q99PJ2 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC7.46□□□□□ -1.22
Trim8Q99PJ2 Gm44116-201ENSMUST00000204269 1525 ntBASIC7.46□□□□□ -1.22
Trim8Q99PJ2 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Trim8Q99PJ2 E430024I08Rik-202ENSMUST00000220632 1513 ntTSL 5 BASIC7.46□□□□□ -1.22
Trim8Q99PJ2 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trim8Q99PJ2 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trim8Q99PJ2 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trim8Q99PJ2 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Trim8Q99PJ2 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trim8Q99PJ2 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trim8Q99PJ2 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Ttc29-201ENSMUST00000049395 2450 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Gm20276-201ENSMUST00000216122 2648 ntBASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Snhg17-209ENSMUST00000186993 3144 ntBASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Ighv1-82-201ENSMUST00000103549 294 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Gm23131-201ENSMUST00000104253 132 ntBASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Gm22150-201ENSMUST00000104447 135 ntBASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Wfdc2-202ENSMUST00000109344 429 ntTSL 3 BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Gm13828-201ENSMUST00000122278 363 ntBASIC7.45□□□□□ -1.22
Trim8Q99PJ2 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Gm23187-201ENSMUST00000175746 86 ntBASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Gm7560-201ENSMUST00000187748 873 ntBASIC7.45□□□□□ -1.22
Trim8Q99PJ2 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Gm43247-201ENSMUST00000198638 481 ntBASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Gm43222-201ENSMUST00000199013 603 ntBASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Gm19211-201ENSMUST00000200251 1206 ntBASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Gm44237-201ENSMUST00000205183 936 ntBASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 BC042761-201ENSMUST00000218344 938 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 AC153864.1-201ENSMUST00000218482 523 ntBASIC7.45□□□□□ -1.22
Trim8Q99PJ2 AC152169.2-201ENSMUST00000224558 613 ntBASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Gm37945-201ENSMUST00000192536 4367 ntBASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 9530052C20Rik-201ENSMUST00000181882 1372 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Trim8Q99PJ2 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC7.44□□□□□ -1.22
Trim8Q99PJ2 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Trim8Q99PJ2 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim8Q99PJ2 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim8Q99PJ2 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC7.44□□□□□ -1.22
Trim8Q99PJ2 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim8Q99PJ2 Spp1-205ENSMUST00000112748 1456 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim8Q99PJ2 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim8Q99PJ2 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim8Q99PJ2 AC154270.2-201ENSMUST00000226755 2306 ntBASIC7.44□□□□□ -1.22
Trim8Q99PJ2 Gm44550-201ENSMUST00000207311 2058 ntBASIC7.44□□□□□ -1.22
Trim8Q99PJ2 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim8Q99PJ2 Ighv1-59-201ENSMUST00000103530 348 ntAPPRIS ALT2 BASIC7.44□□□□□ -1.22
Trim8Q99PJ2 Lypd8-202ENSMUST00000108826 1219 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim8Q99PJ2 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim8Q99PJ2 Gm14528-201ENSMUST00000120615 231 ntBASIC7.44□□□□□ -1.22
Trim8Q99PJ2 Gm12634-201ENSMUST00000122157 992 ntBASIC7.44□□□□□ -1.22
Trim8Q99PJ2 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim8Q99PJ2 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim8Q99PJ2 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC7.44□□□□□ -1.22
Trim8Q99PJ2 Gm26048-201ENSMUST00000157305 142 ntBASIC7.44□□□□□ -1.22
Trim8Q99PJ2 Gm22949-201ENSMUST00000158562 105 ntBASIC7.44□□□□□ -1.22
Trim8Q99PJ2 Olfr457-201ENSMUST00000170504 1039 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Trim8Q99PJ2 Six3os1-213ENSMUST00000177487 537 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim8Q99PJ2 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC7.44□□□□□ -1.22
Trim8Q99PJ2 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC7.44□□□□□ -1.22
Trim8Q99PJ2 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC7.44□□□□□ -1.22
Trim8Q99PJ2 Gm5835-201ENSMUST00000185806 1270 ntBASIC7.44□□□□□ -1.22
Trim8Q99PJ2 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC7.44□□□□□ -1.22
Trim8Q99PJ2 Gm28149-201ENSMUST00000187102 378 ntBASIC7.44□□□□□ -1.22
Trim8Q99PJ2 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC7.44□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms