Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm17091-201ENSMUST00000163248 357 ntBASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm8304-201ENSMUST00000185744 584 ntBASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm28546-201ENSMUST00000188221 615 ntBASIC7.18□□□□□ -1.26
Clrn1Q8K445 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm29562-201ENSMUST00000190113 904 ntBASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm43491-201ENSMUST00000197133 784 ntBASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm44830-201ENSMUST00000207667 584 ntBASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm30196-201ENSMUST00000208957 160 ntBASIC7.18□□□□□ -1.26
Clrn1Q8K445 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm45756-201ENSMUST00000212491 407 ntBASIC7.18□□□□□ -1.26
Clrn1Q8K445 AC163623.2-202ENSMUST00000214165 610 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Clrn1Q8K445 AC160635.1-201ENSMUST00000216731 474 ntBASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm5948-201ENSMUST00000219627 839 ntBASIC7.18□□□□□ -1.26
Clrn1Q8K445 AC162934.3-201ENSMUST00000223015 841 ntBASIC7.18□□□□□ -1.26
Clrn1Q8K445 AL589696.1-201ENSMUST00000225711 330 ntBASIC7.18□□□□□ -1.26
Clrn1Q8K445 AC107757.1-201ENSMUST00000226780 357 ntBASIC7.18□□□□□ -1.26
Clrn1Q8K445 Vmn1r41-204ENSMUST00000227039 985 ntBASIC7.18□□□□□ -1.26
Clrn1Q8K445 AC124715.1-201ENSMUST00000228480 754 ntBASIC7.18□□□□□ -1.26
Clrn1Q8K445 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm37109-201ENSMUST00000195475 2254 ntBASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm12586-201ENSMUST00000117328 1316 ntBASIC7.18□□□□□ -1.26
Clrn1Q8K445 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm26831-201ENSMUST00000181458 1380 ntBASIC7.18□□□□□ -1.26
Clrn1Q8K445 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Clrn1Q8K445 Gm43422-201ENSMUST00000199780 3571 ntBASIC7.18□□□□□ -1.26
Clrn1Q8K445 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Vmn2r55-202ENSMUST00000172743 2346 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Malat1-201ENSMUST00000172812 6983 ntBASIC7.17□□□□□ -1.26
Clrn1Q8K445 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Gm26920-201ENSMUST00000182746 2374 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Vmn2r41-201ENSMUST00000168807 3617 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Gm44228-201ENSMUST00000204888 2026 ntBASIC7.17□□□□□ -1.26
Clrn1Q8K445 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC7.17□□□□□ -1.26
Clrn1Q8K445 Olfr702-204ENSMUST00000219803 1646 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Gm22022-201ENSMUST00000104355 127 ntBASIC7.17□□□□□ -1.26
Clrn1Q8K445 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Gm5228-201ENSMUST00000117186 357 ntBASIC7.17□□□□□ -1.26
Clrn1Q8K445 Gm14746-201ENSMUST00000120309 741 ntBASIC7.17□□□□□ -1.26
Clrn1Q8K445 BC002163-201ENSMUST00000121906 319 ntBASIC7.17□□□□□ -1.26
Clrn1Q8K445 E130215H24Rik-201ENSMUST00000145525 939 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Mir1983-201ENSMUST00000157523 132 ntBASIC7.17□□□□□ -1.26
Clrn1Q8K445 Gm24824-201ENSMUST00000175097 78 ntBASIC7.17□□□□□ -1.26
Clrn1Q8K445 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Gm27595-201ENSMUST00000184579 112 ntBASIC7.17□□□□□ -1.26
Clrn1Q8K445 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Gm37555-201ENSMUST00000195711 542 ntTSL 5 BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Gm43694-201ENSMUST00000200773 1119 ntBASIC7.17□□□□□ -1.26
Clrn1Q8K445 Gm42887-201ENSMUST00000202469 1119 ntBASIC7.17□□□□□ -1.26
Clrn1Q8K445 Gm45900-201ENSMUST00000211879 409 ntBASIC7.17□□□□□ -1.26
Clrn1Q8K445 Gm33778-201ENSMUST00000216884 704 ntBASIC7.17□□□□□ -1.26
Clrn1Q8K445 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC7.17□□□□□ -1.26
Clrn1Q8K445 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Clrn1Q8K445 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms