Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm37783-201ENSMUST00000192025 1856 ntBASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Gm11961-201ENSMUST00000135775 1319 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Gm37169-201ENSMUST00000195599 4161 ntBASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Malat1-201ENSMUST00000172812 6983 ntBASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Gm13929-201ENSMUST00000117553 1125 ntBASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Gm13858-201ENSMUST00000118862 671 ntBASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Mir8099-2-201ENSMUST00000183568 127 ntBASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Mir8099-1-201ENSMUST00000184238 127 ntBASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Gm18351-201ENSMUST00000188646 883 ntBASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Gm29739-201ENSMUST00000191760 529 ntBASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Mir1897-202ENSMUST00000198006 79 ntBASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Gm43235-201ENSMUST00000200121 297 ntBASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 AC108846.4-201ENSMUST00000216783 341 ntBASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 AC151904.2-201ENSMUST00000218683 1177 ntBASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Gm33684-201ENSMUST00000221119 263 ntTSL 3 BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 AC163038.4-201ENSMUST00000224942 474 ntBASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 1700049L16Rik-201ENSMUST00000049520 543 ntBASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Olfr402-201ENSMUST00000073675 1012 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Gm43483-201ENSMUST00000196724 2860 ntBASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Ccdc38Q8CDN8 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Gm20768-201ENSMUST00000199527 2338 ntBASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Gm16056-201ENSMUST00000119293 135 ntBASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Gm15224-201ENSMUST00000120501 388 ntBASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Gm15730-201ENSMUST00000121828 415 ntBASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 n-R5s47-201ENSMUST00000122516 119 ntBASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Gm3611-201ENSMUST00000173687 877 ntBASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Gm8974-201ENSMUST00000175770 479 ntBASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Gm20702-201ENSMUST00000176181 460 ntBASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Gm18690-201ENSMUST00000204488 985 ntBASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Gm18469-201ENSMUST00000208850 439 ntBASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 AC163041.2-201ENSMUST00000223082 573 ntBASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 AC130673.1-201ENSMUST00000227992 435 ntBASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Olfr742-201ENSMUST00000089836 1120 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Gm14035-201ENSMUST00000117596 1475 ntBASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ccdc38Q8CDN8 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms