Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 Gm18960-201ENSMUST00000222962 713 ntBASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 AL844586.1-201ENSMUST00000224297 1042 ntBASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 AC154747.4-201ENSMUST00000224802 903 ntBASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 n-R5s60-201ENSMUST00000083299 119 ntBASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 Gm16020-201ENSMUST00000084281 210 ntBASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Zfp831-201ENSMUST00000059452 9807 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 AC164978.1-201ENSMUST00000228608 4011 ntBASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 CT009604.1-201ENSMUST00000223900 1328 ntBASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Tenm1-201ENSMUST00000016294 8365 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Gm26016-201ENSMUST00000104403 129 ntBASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Gm15665-201ENSMUST00000119116 847 ntBASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Gm13130-201ENSMUST00000119195 1166 ntBASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Gm11371-201ENSMUST00000120294 385 ntBASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Gm15362-201ENSMUST00000121459 388 ntBASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Defa-ps10-201ENSMUST00000121649 171 ntBASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Gm17047-201ENSMUST00000167709 430 ntBASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Gm18501-201ENSMUST00000185363 664 ntBASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Gm37548-201ENSMUST00000194519 3814 ntBASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Gm43212-201ENSMUST00000198208 394 ntBASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 CT009738.1-201ENSMUST00000219031 809 ntBASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Gm18503-201ENSMUST00000220340 728 ntBASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Gm22504-201ENSMUST00000082963 139 ntBASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Gm37483-201ENSMUST00000194382 1484 ntBASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Gm43681-201ENSMUST00000201581 1903 ntBASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 CT573019.1-201ENSMUST00000227762 1689 ntBASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Atg4aQ8C9S8 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Gm22024-201ENSMUST00000122733 287 ntBASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Gm8357-201ENSMUST00000181115 1011 ntBASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Mir8094-201ENSMUST00000183361 117 ntBASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Gm2287-201ENSMUST00000197417 1084 ntBASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Gm43725-201ENSMUST00000200122 369 ntBASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Gm42573-201ENSMUST00000202327 478 ntBASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 AC133948.2-201ENSMUST00000217850 378 ntBASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Gcnt2-204ENSMUST00000223570 335 ntBASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 CT009728.1-201ENSMUST00000225228 1050 ntBASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Gm44769-201ENSMUST00000206120 2809 ntBASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Gm44093-201ENSMUST00000204381 1802 ntBASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Nav1-202ENSMUST00000067414 13117 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Gm45407-201ENSMUST00000209499 3676 ntBASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Gm44669-201ENSMUST00000207774 1969 ntBASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Hpgds-201ENSMUST00000031982 3476 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 CT009757.6-201ENSMUST00000220661 2312 ntBASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Gm6640-201ENSMUST00000120629 1587 ntBASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms