Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 AC164978.1-201ENSMUST00000228608 4011 ntBASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Gm12727-201ENSMUST00000119885 359 ntBASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Gm24647-201ENSMUST00000157112 113 ntBASIC8.11□□□□□ -1.11
Trim9Q8C7M3 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Gm5272-201ENSMUST00000182730 982 ntBASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Gm20813-201ENSMUST00000186646 705 ntBASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Gm21923-201ENSMUST00000188455 696 ntBASIC8.11□□□□□ -1.11
Trim9Q8C7M3 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC8.11□□□□□ -1.11
Trim9Q8C7M3 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC8.11□□□□□ -1.11
Trim9Q8C7M3 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 AC159205.2-201ENSMUST00000223759 816 ntBASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Gm44130-201ENSMUST00000205157 3004 ntBASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Gm37510-201ENSMUST00000194151 4762 ntBASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 CT025619.3-201ENSMUST00000216299 3267 ntBASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Trim9Q8C7M3 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 CT025639.1-201ENSMUST00000223906 1375 ntBASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Gm45512-201ENSMUST00000210432 1553 ntBASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Gm44898-201ENSMUST00000205934 2223 ntBASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Gm44669-201ENSMUST00000207774 1969 ntBASIC8.1□□□□□ -1.11
Trim9Q8C7M3 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 n-R5s9-201ENSMUST00000104432 117 ntBASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Gm25725-201ENSMUST00000104528 130 ntBASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Gm6491-201ENSMUST00000118273 990 ntBASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Gm12219-201ENSMUST00000119198 443 ntBASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Gm14787-201ENSMUST00000121236 388 ntBASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Gm12920-201ENSMUST00000121818 1186 ntBASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Gm8305-201ENSMUST00000180022 1195 ntBASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC8.1□□□□□ -1.11
Trim9Q8C7M3 AC165260.3-201ENSMUST00000225101 665 ntBASIC8.1□□□□□ -1.11
Trim9Q8C7M3 CT009728.1-201ENSMUST00000225228 1050 ntBASIC8.1□□□□□ -1.11
Trim9Q8C7M3 AC121997.2-202ENSMUST00000227158 939 ntBASIC8.1□□□□□ -1.11
Trim9Q8C7M3 AC165154.2-201ENSMUST00000227310 336 ntBASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms