Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Gm26945-201ENSMUST00000183191 2011 ntBASIC7.56□□□□□ -1.2
Trub1Q8C0D0 CT009480.1-201ENSMUST00000225771 4480 ntBASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Gm45512-201ENSMUST00000210432 1553 ntBASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Gm7910-201ENSMUST00000117896 835 ntBASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Gm6491-201ENSMUST00000118273 990 ntBASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Gm11320-201ENSMUST00000119434 463 ntBASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Gm11850-201ENSMUST00000119679 479 ntBASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Mir3072-201ENSMUST00000175610 83 ntBASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Gm45478-201ENSMUST00000209472 211 ntBASIC7.56□□□□□ -1.2
Trub1Q8C0D0 AC159205.2-201ENSMUST00000223759 816 ntBASIC7.56□□□□□ -1.2
Trub1Q8C0D0 CT009728.1-201ENSMUST00000225228 1050 ntBASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 CT025639.1-201ENSMUST00000223906 1375 ntBASIC7.56□□□□□ -1.2
Trub1Q8C0D0 CT025619.3-201ENSMUST00000216299 3267 ntBASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Gm44898-201ENSMUST00000205934 2223 ntBASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 n-R5s72-201ENSMUST00000104518 119 ntBASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Gm13163-201ENSMUST00000119875 336 ntBASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Gm12727-201ENSMUST00000119885 359 ntBASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Gm14787-201ENSMUST00000121236 388 ntBASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Gm12920-201ENSMUST00000121818 1186 ntBASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Gm24893-201ENSMUST00000122745 369 ntBASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Gm16027-201ENSMUST00000161618 758 ntBASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Gm8305-201ENSMUST00000180022 1195 ntBASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Gm25947-201ENSMUST00000180343 110 ntBASIC7.55□□□□□ -1.2
Trub1Q8C0D0 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Gm20813-201ENSMUST00000186646 705 ntBASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Gm21923-201ENSMUST00000188455 696 ntBASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC7.55□□□□□ -1.2
Trub1Q8C0D0 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Gm5791-201ENSMUST00000220840 489 ntBASIC7.55□□□□□ -1.2
Trub1Q8C0D0 AC121997.2-202ENSMUST00000227158 939 ntBASIC7.55□□□□□ -1.2
Trub1Q8C0D0 AC165154.2-201ENSMUST00000227310 336 ntBASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Gm44130-201ENSMUST00000205157 3004 ntBASIC7.55□□□□□ -1.2
Trub1Q8C0D0 AC159195.2-201ENSMUST00000223670 3757 ntBASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Gm11853-201ENSMUST00000119687 1384 ntBASIC7.55□□□□□ -1.2
Trub1Q8C0D0 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Gm21152-201ENSMUST00000190271 3483 ntBASIC7.55□□□□□ -1.2
Trub1Q8C0D0 AC153152.1-201ENSMUST00000221105 2742 ntBASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trub1Q8C0D0 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC7.55□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms