Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm26784-201ENSMUST00000181666 410 ntBASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Gm5251-201ENSMUST00000188959 472 ntBASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Gm32842-201ENSMUST00000212653 738 ntBASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Rpl32l-201ENSMUST00000216127 399 ntBASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 AC163296.1-202ENSMUST00000218395 661 ntBASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 AC165349.2-201ENSMUST00000219097 426 ntBASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 AC163296.1-201ENSMUST00000220004 1266 ntBASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Gm4120-201ENSMUST00000220456 578 ntBASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Gm33684-201ENSMUST00000221119 263 ntTSL 3 BASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 CT010480.3-201ENSMUST00000224712 259 ntBASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Gm5564-201ENSMUST00000034916 967 ntBASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Gm37906-201ENSMUST00000192050 3035 ntBASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Ccdc40Q8BI79 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Gm19028-201ENSMUST00000189614 1873 ntBASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 AC159193.3-201ENSMUST00000221902 2622 ntBASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Gm11474-201ENSMUST00000120814 277 ntBASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Gm11203-201ENSMUST00000122169 741 ntBASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Gm5834-201ENSMUST00000126680 1026 ntBASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Gm8893-201ENSMUST00000172146 1242 ntBASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Mir6919-201ENSMUST00000185146 62 ntBASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Gm28983-201ENSMUST00000186685 614 ntBASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Gm28150-201ENSMUST00000187305 614 ntBASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Gm28377-201ENSMUST00000189695 720 ntBASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Gm37469-201ENSMUST00000193728 890 ntBASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Gm18292-201ENSMUST00000216673 919 ntBASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 AC165155.1-201ENSMUST00000228932 445 ntBASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Olfr888-201ENSMUST00000075228 945 ntBASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 AC159002.2-201ENSMUST00000228843 4874 ntBASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Gm45251-201ENSMUST00000209486 1465 ntBASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Gm15681-201ENSMUST00000137501 2704 ntBASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
Ccdc40Q8BI79 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ccdc40Q8BI79 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ccdc40Q8BI79 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ccdc40Q8BI79 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ccdc40Q8BI79 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Ccdc40Q8BI79 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
Ccdc40Q8BI79 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ccdc40Q8BI79 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Ccdc40Q8BI79 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC7.78□□□□□ -1.16
Ccdc40Q8BI79 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC7.78□□□□□ -1.16
Ccdc40Q8BI79 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ccdc40Q8BI79 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ccdc40Q8BI79 Gm13929-201ENSMUST00000117553 1125 ntBASIC7.78□□□□□ -1.16
Ccdc40Q8BI79 Gm13229-201ENSMUST00000118238 340 ntBASIC7.78□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms