Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm42509-201ENSMUST00000197390 781 ntBASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 Gm17977-201ENSMUST00000198743 574 ntBASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 Gm43806-201ENSMUST00000201766 469 ntBASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 Gm44427-201ENSMUST00000204123 456 ntTSL 3 BASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 4933432K03Rik-201ENSMUST00000205739 1247 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 Gm18585-201ENSMUST00000215197 556 ntBASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 Gm40638-201ENSMUST00000216422 682 ntTSL 5 BASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 Gm19056-201ENSMUST00000218220 797 ntBASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 C230072F16Rik-201ENSMUST00000219184 1253 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 AC092710.1-201ENSMUST00000221005 192 ntBASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 CT485612.3-201ENSMUST00000222179 408 ntBASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 AC156576.1-201ENSMUST00000222315 500 ntTSL 5 BASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 CT485612.1-201ENSMUST00000222555 382 ntBASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 Gm5789-201ENSMUST00000222643 865 ntBASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 Gm33115-202ENSMUST00000223487 703 ntTSL 5 BASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 AC163038.3-201ENSMUST00000223945 558 ntBASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 AC133598.3-204ENSMUST00000224260 767 ntBASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 AC165287.1-201ENSMUST00000224985 178 ntBASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 Reg2-201ENSMUST00000023906 698 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 Gm24035-201ENSMUST00000082867 107 ntBASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 Olfr1226-201ENSMUST00000099790 933 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 Ank3-231ENSMUST00000182884 9963 ntAPPRIS P4 TSL 1 (best) BASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 AC102431.2-201ENSMUST00000224071 2448 ntBASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 9530053A07Rik-201ENSMUST00000059886 7922 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 Dusp3-202ENSMUST00000107172 4445 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 Rnf141-209ENSMUST00000177236 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 3830406C13Rik-201ENSMUST00000112669 2477 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 Hpd-201ENSMUST00000031398 1404 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 Gm7869-201ENSMUST00000121457 1322 ntBASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Prpf38bQ80SY5 Kif26b-202ENSMUST00000161017 13749 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Dlg2-202ENSMUST00000098308 2329 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Ddr2-202ENSMUST00000170800 8289 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Gm7328-201ENSMUST00000211123 2225 ntBASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Gm2080-201ENSMUST00000211299 1573 ntBASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Gm44436-201ENSMUST00000204200 1494 ntBASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 B020014A21Rik-201ENSMUST00000217333 1938 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Luzp2-201ENSMUST00000082373 4901 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Cyld-201ENSMUST00000043526 8022 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Sox6-203ENSMUST00000166207 2825 ntAPPRIS P4 TSL 1 (best) BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Gm4919-201ENSMUST00000117825 604 ntBASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Gm15047-201ENSMUST00000118891 454 ntBASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Gm8051-201ENSMUST00000120464 466 ntBASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Gm20617-201ENSMUST00000177082 717 ntTSL 3 BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Gm22111-201ENSMUST00000178010 79 ntBASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Gm23687-201ENSMUST00000178664 79 ntBASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Gm24566-201ENSMUST00000179286 79 ntBASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Gm23305-201ENSMUST00000179342 79 ntBASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Gm26389-201ENSMUST00000179819 79 ntBASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Gm22130-201ENSMUST00000179979 79 ntBASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Gm22393-201ENSMUST00000180153 79 ntBASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Gm25085-201ENSMUST00000180298 79 ntBASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Snhg7-201ENSMUST00000181621 139 ntBASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Gm8321-201ENSMUST00000181691 980 ntBASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Serpinc1-202ENSMUST00000191936 725 ntTSL 3 BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Gm6064-201ENSMUST00000203999 454 ntBASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Mcee-204ENSMUST00000206882 391 ntTSL 2 BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Gm19007-201ENSMUST00000217746 874 ntBASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 AC160114.2-201ENSMUST00000223021 300 ntBASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 CT030260.1-201ENSMUST00000223243 442 ntBASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 CT030645.3-201ENSMUST00000225483 1022 ntBASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Spink10-201ENSMUST00000055725 1113 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Olfr1110-202ENSMUST00000152758 3159 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Tshz2-201ENSMUST00000109157 5083 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Trim39-201ENSMUST00000042717 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Greb1-203ENSMUST00000159120 6346 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Lrtm1-202ENSMUST00000224708 1646 ntAPPRIS ALT2 BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Cpt1a-201ENSMUST00000025835 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Rnmt-201ENSMUST00000009679 5008 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 AC112265.1-201ENSMUST00000213522 1501 ntTSL 5 BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Pde7b-201ENSMUST00000020165 4137 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Prpf38bQ80SY5 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms