Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Birc5-202ENSMUST00000093906 3334 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Smarcc1P97496 Runx1t1-202ENSMUST00000098256 3317 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smarcc1P97496 Gm11416-201ENSMUST00000119111 863 ntBASIC9.44□□□□□ -0.9
Smarcc1P97496 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC9.44□□□□□ -0.9
Smarcc1P97496 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Smarcc1P97496 Gm37383-201ENSMUST00000191750 745 ntBASIC9.44□□□□□ -0.9
Smarcc1P97496 Gm37841-201ENSMUST00000195367 376 ntBASIC9.44□□□□□ -0.9
Smarcc1P97496 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Smarcc1P97496 Gm43560-201ENSMUST00000198100 773 ntBASIC9.44□□□□□ -0.9
Smarcc1P97496 Gm43926-201ENSMUST00000203978 430 ntBASIC9.44□□□□□ -0.9
Smarcc1P97496 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC9.44□□□□□ -0.9
Smarcc1P97496 CT030166.4-201ENSMUST00000220640 404 ntBASIC9.44□□□□□ -0.9
Smarcc1P97496 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smarcc1P97496 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Smarcc1P97496 BC085271-201ENSMUST00000191852 1487 ntBASIC9.44□□□□□ -0.9
Smarcc1P97496 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smarcc1P97496 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smarcc1P97496 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smarcc1P97496 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Smarcc1P97496 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smarcc1P97496 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Smarcc1P97496 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Smarcc1P97496 Eif4e2-207ENSMUST00000113235 3473 ntTSL 5 BASIC9.44□□□□□ -0.9
Smarcc1P97496 Trpa1-201ENSMUST00000041447 4263 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smarcc1P97496 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smarcc1P97496 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smarcc1P97496 Gm43430-201ENSMUST00000196513 3897 ntBASIC9.43□□□□□ -0.9
Smarcc1P97496 Stox2-202ENSMUST00000110367 3424 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smarcc1P97496 Gm43800-201ENSMUST00000201868 2731 ntBASIC9.43□□□□□ -0.9
Smarcc1P97496 Gm42648-201ENSMUST00000200774 2505 ntBASIC9.43□□□□□ -0.9
Smarcc1P97496 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smarcc1P97496 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Smarcc1P97496 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smarcc1P97496 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
Smarcc1P97496 Gm25877-201ENSMUST00000104326 129 ntBASIC9.43□□□□□ -0.9
Smarcc1P97496 Gm12653-201ENSMUST00000117778 561 ntBASIC9.43□□□□□ -0.9
Smarcc1P97496 Gm13545-201ENSMUST00000119044 482 ntBASIC9.43□□□□□ -0.9
Smarcc1P97496 Gm16056-201ENSMUST00000119293 135 ntBASIC9.43□□□□□ -0.9
Smarcc1P97496 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smarcc1P97496 Gm14863-201ENSMUST00000119648 307 ntBASIC9.43□□□□□ -0.9
Smarcc1P97496 Gm12321-201ENSMUST00000121485 804 ntBASIC9.43□□□□□ -0.9
Smarcc1P97496 Gm13487-201ENSMUST00000122240 864 ntBASIC9.43□□□□□ -0.9
Smarcc1P97496 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC9.43□□□□□ -0.9
Smarcc1P97496 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smarcc1P97496 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Smarcc1P97496 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC9.43□□□□□ -0.9
Smarcc1P97496 Gm42782-201ENSMUST00000197286 522 ntBASIC9.43□□□□□ -0.9
Smarcc1P97496 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC9.43□□□□□ -0.9
Smarcc1P97496 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smarcc1P97496 Gm43772-201ENSMUST00000202052 379 ntBASIC9.43□□□□□ -0.9
Smarcc1P97496 Gm8575-201ENSMUST00000210262 521 ntBASIC9.43□□□□□ -0.9
Smarcc1P97496 AC091237.1-201ENSMUST00000224911 637 ntBASIC9.43□□□□□ -0.9
Smarcc1P97496 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smarcc1P97496 Olfr559-201ENSMUST00000084816 1022 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Smarcc1P97496 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Smarcc1P97496 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smarcc1P97496 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smarcc1P97496 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Smarcc1P97496 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Smarcc1P97496 AC126251.1-201ENSMUST00000228170 2707 ntBASIC9.43□□□□□ -0.9
Smarcc1P97496 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smarcc1P97496 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smarcc1P97496 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smarcc1P97496 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smarcc1P97496 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smarcc1P97496 Phc3-203ENSMUST00000099163 2808 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smarcc1P97496 Gm43609-201ENSMUST00000199084 2712 ntBASIC9.42□□□□□ -0.9
Smarcc1P97496 Gm45737-201ENSMUST00000208344 1612 ntBASIC9.42□□□□□ -0.9
Smarcc1P97496 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smarcc1P97496 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Smarcc1P97496 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smarcc1P97496 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Smarcc1P97496 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
Smarcc1P97496 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Smarcc1P97496 Gm38288-201ENSMUST00000195330 1320 ntBASIC9.42□□□□□ -0.9
Smarcc1P97496 Gm28852-201ENSMUST00000186666 2160 ntTSL 5 BASIC9.42□□□□□ -0.9
Smarcc1P97496 Gm28880-201ENSMUST00000190161 2160 ntTSL 5 BASIC9.42□□□□□ -0.9
Smarcc1P97496 Gm44007-201ENSMUST00000203845 2189 ntBASIC9.42□□□□□ -0.9
Smarcc1P97496 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Smarcc1P97496 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Smarcc1P97496 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smarcc1P97496 Gm15913-201ENSMUST00000118492 331 ntBASIC9.42□□□□□ -0.9
Smarcc1P97496 Gm8421-201ENSMUST00000119439 305 ntBASIC9.42□□□□□ -0.9
Smarcc1P97496 Gm13622-201ENSMUST00000120658 433 ntBASIC9.42□□□□□ -0.9
Smarcc1P97496 Gm12400-201ENSMUST00000120915 1003 ntBASIC9.42□□□□□ -0.9
Smarcc1P97496 Gm5843-201ENSMUST00000121631 476 ntBASIC9.42□□□□□ -0.9
Smarcc1P97496 Gm12158-201ENSMUST00000130493 631 ntTSL 3 BASIC9.42□□□□□ -0.9
Smarcc1P97496 Gm12504-202ENSMUST00000148026 306 ntBASIC9.42□□□□□ -0.9
Smarcc1P97496 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smarcc1P97496 Gm16138-201ENSMUST00000159341 821 ntBASIC9.42□□□□□ -0.9
Smarcc1P97496 Gm16113-201ENSMUST00000159629 372 ntBASIC9.42□□□□□ -0.9
Smarcc1P97496 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC9.42□□□□□ -0.9
Smarcc1P97496 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Smarcc1P97496 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC9.42□□□□□ -0.9
Smarcc1P97496 Gm38226-201ENSMUST00000192207 521 ntBASIC9.42□□□□□ -0.9
Smarcc1P97496 Gm43595-201ENSMUST00000196464 1071 ntBASIC9.42□□□□□ -0.9
Smarcc1P97496 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smarcc1P97496 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smarcc1P97496 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC9.42□□□□□ -0.9
Smarcc1P97496 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 183.7 ms