Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC8.13□□□□□ -1.11
Tpm1P58771 1700025H01Rik-201ENSMUST00000187479 547 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Tpm1P58771 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC8.13□□□□□ -1.11
Tpm1P58771 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC8.13□□□□□ -1.11
Tpm1P58771 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC8.13□□□□□ -1.11
Tpm1P58771 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC8.13□□□□□ -1.11
Tpm1P58771 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Tpm1P58771 AC154307.1-201ENSMUST00000214799 90 ntBASIC8.13□□□□□ -1.11
Tpm1P58771 Gm35412-201ENSMUST00000220437 999 ntBASIC8.13□□□□□ -1.11
Tpm1P58771 AC069562.1-201ENSMUST00000224206 434 ntBASIC8.13□□□□□ -1.11
Tpm1P58771 Eqtn-201ENSMUST00000030309 1074 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Tpm1P58771 Gm9761-201ENSMUST00000075650 492 ntBASIC8.13□□□□□ -1.11
Tpm1P58771 Gm5407-201ENSMUST00000080694 747 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Tpm1P58771 Gm4956-201ENSMUST00000082032 1148 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Tpm1P58771 Gm7275-201ENSMUST00000088296 744 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Tpm1P58771 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Tpm1P58771 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC8.13□□□□□ -1.11
Tpm1P58771 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Tpm1P58771 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Tpm1P58771 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Tpm1P58771 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Tpm1P58771 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Tpm1P58771 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Tpm1P58771 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Tpm1P58771 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Tpm1P58771 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Tpm1P58771 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Tpm1P58771 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Tpm1P58771 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Tpm1P58771 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC8.13□□□□□ -1.11
Tpm1P58771 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC8.13□□□□□ -1.11
Tpm1P58771 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Tpm1P58771 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Tpm1P58771 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Tpm1P58771 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Tpm1P58771 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC8.12□□□□□ -1.11
Tpm1P58771 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC8.12□□□□□ -1.11
Tpm1P58771 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Tpm1P58771 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Tpm1P58771 AC122356.1-202ENSMUST00000227328 2758 ntBASIC8.12□□□□□ -1.11
Tpm1P58771 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Tpm1P58771 Gm12021-201ENSMUST00000121061 1746 ntBASIC8.12□□□□□ -1.11
Tpm1P58771 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Tpm1P58771 Dpep2-202ENSMUST00000117555 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Tpm1P58771 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Tpm1P58771 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Tpm1P58771 Gm37653-201ENSMUST00000195401 3578 ntBASIC8.12□□□□□ -1.11
Tpm1P58771 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Tpm1P58771 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Tpm1P58771 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
Tpm1P58771 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Tpm1P58771 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Tpm1P58771 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Tpm1P58771 Zfx-202ENSMUST00000113925 879 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Tpm1P58771 Gm13552-201ENSMUST00000118837 417 ntBASIC8.12□□□□□ -1.11
Tpm1P58771 Gm14414-201ENSMUST00000120833 573 ntBASIC8.12□□□□□ -1.11
Tpm1P58771 Gm15096-201ENSMUST00000121918 878 ntBASIC8.12□□□□□ -1.11
Tpm1P58771 Gm16150-201ENSMUST00000127620 437 ntTSL 5 BASIC8.12□□□□□ -1.11
Tpm1P58771 Trav8-2-201ENSMUST00000130122 337 ntBASIC8.12□□□□□ -1.11
Tpm1P58771 Gm5970-201ENSMUST00000131638 1216 ntBASIC8.12□□□□□ -1.11
Tpm1P58771 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
Tpm1P58771 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Tpm1P58771 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Tpm1P58771 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Tpm1P58771 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Tpm1P58771 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
Tpm1P58771 Gm27288-201ENSMUST00000184215 80 ntBASIC8.12□□□□□ -1.11
Tpm1P58771 Gm27597-201ENSMUST00000184365 80 ntBASIC8.12□□□□□ -1.11
Tpm1P58771 Gm27506-201ENSMUST00000184558 80 ntBASIC8.12□□□□□ -1.11
Tpm1P58771 Gm27529-201ENSMUST00000184975 80 ntBASIC8.12□□□□□ -1.11
Tpm1P58771 Mir6403-201ENSMUST00000185007 129 ntBASIC8.12□□□□□ -1.11
Tpm1P58771 Gm27907-201ENSMUST00000185101 80 ntBASIC8.12□□□□□ -1.11
Tpm1P58771 Gm8307-201ENSMUST00000187682 1150 ntBASIC8.12□□□□□ -1.11
Tpm1P58771 Gm37481-201ENSMUST00000195176 403 ntBASIC8.12□□□□□ -1.11
Tpm1P58771 Gm17835-201ENSMUST00000196870 499 ntBASIC8.12□□□□□ -1.11
Tpm1P58771 Gm42424-201ENSMUST00000198319 376 ntBASIC8.12□□□□□ -1.11
Tpm1P58771 Gm43805-201ENSMUST00000198488 824 ntBASIC8.12□□□□□ -1.11
Tpm1P58771 Gm26911-203ENSMUST00000204781 369 ntTSL 3 BASIC8.12□□□□□ -1.11
Tpm1P58771 Gm19254-201ENSMUST00000204828 294 ntBASIC8.12□□□□□ -1.11
Tpm1P58771 4930557K07Rik-201ENSMUST00000205110 363 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Tpm1P58771 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC8.12□□□□□ -1.11
Tpm1P58771 Olfr1065-203ENSMUST00000216165 992 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Tpm1P58771 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Tpm1P58771 Gm18112-201ENSMUST00000219862 1195 ntBASIC8.12□□□□□ -1.11
Tpm1P58771 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Tpm1P58771 CT030170.6-202ENSMUST00000223186 544 ntBASIC8.12□□□□□ -1.11
Tpm1P58771 AC163660.3-202ENSMUST00000224917 464 ntBASIC8.12□□□□□ -1.11
Tpm1P58771 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC8.12□□□□□ -1.11
Tpm1P58771 Olfr890-201ENSMUST00000079804 945 ntBASIC8.12□□□□□ -1.11
Tpm1P58771 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Tpm1P58771 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Tpm1P58771 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Tpm1P58771 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC8.12□□□□□ -1.11
Tpm1P58771 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Tpm1P58771 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC8.12□□□□□ -1.11
Tpm1P58771 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Tpm1P58771 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Tpm1P58771 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Tpm1P58771 AC139941.2-201ENSMUST00000221565 1824 ntBASIC8.12□□□□□ -1.11
Tpm1P58771 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms