Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Shmt1P50431 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC7.93□□□□□ -1.14
Shmt1P50431 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Shmt1P50431 Gm8844-201ENSMUST00000119460 2614 ntBASIC7.93□□□□□ -1.14
Shmt1P50431 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Shmt1P50431 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Shmt1P50431 Gm18537-202ENSMUST00000206215 1503 ntBASIC7.93□□□□□ -1.14
Shmt1P50431 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Shmt1P50431 Gm37706-201ENSMUST00000195379 2765 ntBASIC7.93□□□□□ -1.14
Shmt1P50431 Gm31152-201ENSMUST00000210319 2171 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Shmt1P50431 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Shmt1P50431 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Shmt1P50431 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC7.93□□□□□ -1.14
Shmt1P50431 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
Shmt1P50431 Syn3-201ENSMUST00000120638 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Shmt1P50431 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Shmt1P50431 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Shmt1P50431 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Shmt1P50431 Stox2-202ENSMUST00000110367 3424 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Shmt1P50431 Gm37499-201ENSMUST00000194683 3478 ntBASIC7.92□□□□□ -1.14
Shmt1P50431 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Shmt1P50431 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Shmt1P50431 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Shmt1P50431 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC7.92□□□□□ -1.14
Shmt1P50431 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Shmt1P50431 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Shmt1P50431 Gm22470-201ENSMUST00000104117 130 ntBASIC7.92□□□□□ -1.14
Shmt1P50431 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Shmt1P50431 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC7.92□□□□□ -1.14
Shmt1P50431 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
Shmt1P50431 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
Shmt1P50431 Gm11865-201ENSMUST00000118093 859 ntBASIC7.92□□□□□ -1.14
Shmt1P50431 Gm11926-201ENSMUST00000118520 430 ntBASIC7.92□□□□□ -1.14
Shmt1P50431 Gm16056-201ENSMUST00000119293 135 ntBASIC7.92□□□□□ -1.14
Shmt1P50431 Gm13525-201ENSMUST00000120607 478 ntBASIC7.92□□□□□ -1.14
Shmt1P50431 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC7.92□□□□□ -1.14
Shmt1P50431 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC7.92□□□□□ -1.14
Shmt1P50431 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
Shmt1P50431 Gm23639-201ENSMUST00000175078 132 ntBASIC7.92□□□□□ -1.14
Shmt1P50431 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Shmt1P50431 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Shmt1P50431 Gm27596-201ENSMUST00000185061 83 ntBASIC7.92□□□□□ -1.14
Shmt1P50431 Gm10297-201ENSMUST00000207136 651 ntBASIC7.92□□□□□ -1.14
Shmt1P50431 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC7.92□□□□□ -1.14
Shmt1P50431 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Shmt1P50431 Gm22748-201ENSMUST00000082493 136 ntBASIC7.92□□□□□ -1.14
Shmt1P50431 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Shmt1P50431 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
Shmt1P50431 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Shmt1P50431 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Shmt1P50431 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Shmt1P50431 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Shmt1P50431 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Shmt1P50431 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Shmt1P50431 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Shmt1P50431 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC7.92□□□□□ -1.14
Shmt1P50431 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Shmt1P50431 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Shmt1P50431 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC7.91□□□□□ -1.14
Shmt1P50431 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Shmt1P50431 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Shmt1P50431 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC7.91□□□□□ -1.14
Shmt1P50431 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Shmt1P50431 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Shmt1P50431 Gm43422-201ENSMUST00000199780 3571 ntBASIC7.91□□□□□ -1.14
Shmt1P50431 Gm42969-201ENSMUST00000199858 3631 ntBASIC7.91□□□□□ -1.14
Shmt1P50431 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Shmt1P50431 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Shmt1P50431 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC7.91□□□□□ -1.14
Shmt1P50431 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Shmt1P50431 4921509C19Rik-201ENSMUST00000080132 2684 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Shmt1P50431 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Shmt1P50431 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC7.91□□□□□ -1.14
Shmt1P50431 Gm43534-201ENSMUST00000197685 2853 ntBASIC7.91□□□□□ -1.14
Shmt1P50431 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Shmt1P50431 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Shmt1P50431 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC7.91□□□□□ -1.14
Shmt1P50431 Gm15362-201ENSMUST00000121459 388 ntBASIC7.91□□□□□ -1.14
Shmt1P50431 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC7.91□□□□□ -1.14
Shmt1P50431 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC7.91□□□□□ -1.14
Shmt1P50431 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC7.91□□□□□ -1.14
Shmt1P50431 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC7.91□□□□□ -1.14
Shmt1P50431 Gm26413-201ENSMUST00000196783 126 ntBASIC7.91□□□□□ -1.14
Shmt1P50431 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC7.91□□□□□ -1.14
Shmt1P50431 Gm20177-201ENSMUST00000203705 334 ntBASIC7.91□□□□□ -1.14
Shmt1P50431 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC7.91□□□□□ -1.14
Shmt1P50431 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC7.91□□□□□ -1.14
Shmt1P50431 AC154627.1-201ENSMUST00000228799 1286 ntBASIC7.91□□□□□ -1.14
Shmt1P50431 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC7.91□□□□□ -1.14
Shmt1P50431 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Shmt1P50431 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Shmt1P50431 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Shmt1P50431 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Shmt1P50431 Gm7842-201ENSMUST00000217691 1379 ntBASIC7.91□□□□□ -1.14
Shmt1P50431 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Shmt1P50431 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Shmt1P50431 Gm9866-206ENSMUST00000222838 1580 ntTSL 5 BASIC7.91□□□□□ -1.14
Shmt1P50431 Gm43766-201ENSMUST00000200590 5417 ntBASIC7.91□□□□□ -1.14
Shmt1P50431 Gm19028-201ENSMUST00000189614 1873 ntBASIC7.91□□□□□ -1.14
Shmt1P50431 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms