Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm8305-201ENSMUST00000180022 1195 ntBASIC7.69□□□□□ -1.18
Cxcl12P40224 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Cxcl12P40224 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC7.69□□□□□ -1.18
Cxcl12P40224 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Cxcl12P40224 Gm43116-201ENSMUST00000199789 195 ntBASIC7.69□□□□□ -1.18
Cxcl12P40224 Gm7452-201ENSMUST00000200764 788 ntBASIC7.69□□□□□ -1.18
Cxcl12P40224 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC7.69□□□□□ -1.18
Cxcl12P40224 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Cxcl12P40224 Gm38574-201ENSMUST00000211855 640 ntBASIC7.69□□□□□ -1.18
Cxcl12P40224 AC165349.1-201ENSMUST00000217896 424 ntBASIC7.69□□□□□ -1.18
Cxcl12P40224 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Cxcl12P40224 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Cxcl12P40224 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Cxcl12P40224 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Cxcl12P40224 Slc37a2-202ENSMUST00000161114 2945 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Cxcl12P40224 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Cxcl12P40224 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Cxcl12P40224 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Cxcl12P40224 Acbd5-202ENSMUST00000114523 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Cxcl12P40224 Gm4279-201ENSMUST00000154314 2329 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Cxcl12P40224 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Cxcl12P40224 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Cxcl12P40224 Zfp827-201ENSMUST00000087927 2801 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Cxcl12P40224 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Cxcl12P40224 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Cxcl12P40224 Gm28469-201ENSMUST00000186374 2166 ntTSL 5 BASIC7.69□□□□□ -1.18
Cxcl12P40224 Gm28134-201ENSMUST00000188690 2166 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Cxcl12P40224 Gm37075-201ENSMUST00000191888 2166 ntTSL 5 BASIC7.69□□□□□ -1.18
Cxcl12P40224 Gm37574-201ENSMUST00000194264 2166 ntTSL 5 BASIC7.69□□□□□ -1.18
Cxcl12P40224 Grip1-210ENSMUST00000144825 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Cxcl12P40224 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Cxcl12P40224 Olfr806-202ENSMUST00000213239 3724 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Cxcl12P40224 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
Cxcl12P40224 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
Cxcl12P40224 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Cxcl12P40224 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Cxcl12P40224 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Cxcl12P40224 Grm8-201ENSMUST00000090512 2830 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Cxcl12P40224 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC7.68□□□□□ -1.18
Cxcl12P40224 Gm16630-201ENSMUST00000180741 3257 ntTSL 5 BASIC7.68□□□□□ -1.18
Cxcl12P40224 Map4k4-215ENSMUST00000195259 3719 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Cxcl12P40224 Zfp607a-201ENSMUST00000053722 2061 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Cxcl12P40224 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Cxcl12P40224 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Cxcl12P40224 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Cxcl12P40224 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC7.68□□□□□ -1.18
Cxcl12P40224 Gm13754-201ENSMUST00000120486 998 ntBASIC7.68□□□□□ -1.18
Cxcl12P40224 Gm12140-201ENSMUST00000121214 544 ntBASIC7.68□□□□□ -1.18
Cxcl12P40224 Gm4660-201ENSMUST00000131499 403 ntBASIC7.68□□□□□ -1.18
Cxcl12P40224 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Cxcl12P40224 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC7.68□□□□□ -1.18
Cxcl12P40224 n-R5s93-201ENSMUST00000180091 119 ntBASIC7.68□□□□□ -1.18
Cxcl12P40224 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Cxcl12P40224 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC7.68□□□□□ -1.18
Cxcl12P40224 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Cxcl12P40224 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC7.68□□□□□ -1.18
Cxcl12P40224 Gm45705-201ENSMUST00000211831 2134 ntBASIC7.68□□□□□ -1.18
Cxcl12P40224 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC7.68□□□□□ -1.18
Cxcl12P40224 AC154323.2-201ENSMUST00000226557 1151 ntBASIC7.68□□□□□ -1.18
Cxcl12P40224 Gm10513-201ENSMUST00000194203 6468 ntBASIC7.68□□□□□ -1.18
Cxcl12P40224 Gm2108-201ENSMUST00000165058 2177 ntBASIC7.68□□□□□ -1.18
Cxcl12P40224 Gm10307-201ENSMUST00000189839 1337 ntBASIC7.68□□□□□ -1.18
Cxcl12P40224 AC132465.1-201ENSMUST00000219938 1307 ntBASIC7.68□□□□□ -1.18
Cxcl12P40224 Gm28906-201ENSMUST00000191371 1779 ntBASIC7.68□□□□□ -1.18
Cxcl12P40224 Hnf4g-201ENSMUST00000108393 2224 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Cxcl12P40224 Gm19210-201ENSMUST00000199562 1350 ntBASIC7.68□□□□□ -1.18
Cxcl12P40224 Gm42973-201ENSMUST00000197913 3200 ntBASIC7.68□□□□□ -1.18
Cxcl12P40224 B430010I23Rik-201ENSMUST00000123703 2349 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Cxcl12P40224 Gm42656-201ENSMUST00000201506 2305 ntBASIC7.68□□□□□ -1.18
Cxcl12P40224 Gm6679-201ENSMUST00000191467 1869 ntBASIC7.68□□□□□ -1.18
Cxcl12P40224 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Cxcl12P40224 Gm44769-201ENSMUST00000206120 2809 ntBASIC7.68□□□□□ -1.18
Cxcl12P40224 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Cxcl12P40224 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Cxcl12P40224 Cks1brt-202ENSMUST00000211617 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Cxcl12P40224 Map3k20-204ENSMUST00000135469 6663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Cxcl12P40224 Gpatch2-206ENSMUST00000160471 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Cxcl12P40224 Add1-201ENSMUST00000001108 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Cxcl12P40224 4831440D22Rik-201ENSMUST00000211287 2929 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Cxcl12P40224 Ovol1-201ENSMUST00000025861 2900 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Cxcl12P40224 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Cxcl12P40224 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Cxcl12P40224 Zwilch-201ENSMUST00000122091 2957 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Cxcl12P40224 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
Cxcl12P40224 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Cxcl12P40224 Fgf13-202ENSMUST00000119306 2091 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Cxcl12P40224 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Cxcl12P40224 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Cxcl12P40224 Lrrc66-201ENSMUST00000087177 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Cxcl12P40224 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC7.67□□□□□ -1.18
Cxcl12P40224 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Cxcl12P40224 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Cxcl12P40224 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC7.67□□□□□ -1.18
Cxcl12P40224 AC161247.1-201ENSMUST00000217744 2295 ntBASIC7.67□□□□□ -1.18
Cxcl12P40224 Smarca1-201ENSMUST00000077569 4024 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
Cxcl12P40224 Iqcg-202ENSMUST00000115100 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Cxcl12P40224 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Cxcl12P40224 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Cxcl12P40224 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC7.67□□□□□ -1.18
Cxcl12P40224 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms