Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Usp4P35123 Trim12a-202ENSMUST00000106837 1389 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Usp4P35123 Gm38325-201ENSMUST00000194507 1377 ntBASIC7.97□□□□□ -1.13
Usp4P35123 Serpina1d-201ENSMUST00000078869 1394 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp4P35123 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC7.96□□□□□ -1.13
Usp4P35123 Olfr702-204ENSMUST00000219803 1646 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Usp4P35123 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Usp4P35123 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Usp4P35123 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Usp4P35123 Gm37364-201ENSMUST00000192533 3920 ntBASIC7.96□□□□□ -1.13
Usp4P35123 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC7.96□□□□□ -1.13
Usp4P35123 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC7.96□□□□□ -1.14
Usp4P35123 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Usp4P35123 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC7.96□□□□□ -1.14
Usp4P35123 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC7.96□□□□□ -1.14
Usp4P35123 Gm13573-201ENSMUST00000116410 631 ntBASIC7.96□□□□□ -1.14
Usp4P35123 Gm26469-201ENSMUST00000116765 121 ntBASIC7.96□□□□□ -1.14
Usp4P35123 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC7.96□□□□□ -1.14
Usp4P35123 Gm12219-201ENSMUST00000119198 443 ntBASIC7.96□□□□□ -1.14
Usp4P35123 Gm9440-201ENSMUST00000119667 539 ntBASIC7.96□□□□□ -1.14
Usp4P35123 Gm13495-201ENSMUST00000121156 537 ntBASIC7.96□□□□□ -1.14
Usp4P35123 Gm15079-201ENSMUST00000121943 216 ntBASIC7.96□□□□□ -1.14
Usp4P35123 Gm25295-201ENSMUST00000122794 306 ntBASIC7.96□□□□□ -1.14
Usp4P35123 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Usp4P35123 Gm22202-201ENSMUST00000158608 311 ntBASIC7.96□□□□□ -1.14
Usp4P35123 Gm18709-201ENSMUST00000180564 489 ntBASIC7.96□□□□□ -1.14
Usp4P35123 Gm18349-201ENSMUST00000187440 904 ntBASIC7.96□□□□□ -1.14
Usp4P35123 Gm28193-201ENSMUST00000189863 615 ntBASIC7.96□□□□□ -1.14
Usp4P35123 Gm44332-201ENSMUST00000203712 433 ntBASIC7.96□□□□□ -1.14
Usp4P35123 Olfr214-202ENSMUST00000203867 1255 ntAPPRIS P1 TSL 3 BASIC7.96□□□□□ -1.14
Usp4P35123 1600020E01Rik-203ENSMUST00000204008 713 ntTSL 5 BASIC7.96□□□□□ -1.14
Usp4P35123 Gm18944-201ENSMUST00000207672 643 ntBASIC7.96□□□□□ -1.14
Usp4P35123 Gm32842-201ENSMUST00000212653 738 ntBASIC7.96□□□□□ -1.14
Usp4P35123 Gm18619-201ENSMUST00000222722 1147 ntBASIC7.96□□□□□ -1.14
Usp4P35123 AC139323.1-201ENSMUST00000223370 1040 ntBASIC7.96□□□□□ -1.14
Usp4P35123 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC7.96□□□□□ -1.14
Usp4P35123 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Usp4P35123 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Usp4P35123 Gm24696-201ENSMUST00000083878 134 ntBASIC7.96□□□□□ -1.14
Usp4P35123 Gm10805-201ENSMUST00000099710 399 ntBASIC7.96□□□□□ -1.14
Usp4P35123 Gm43099-201ENSMUST00000198943 5241 ntBASIC7.96□□□□□ -1.14
Usp4P35123 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Usp4P35123 AC135119.1-202ENSMUST00000228435 2203 ntBASIC7.96□□□□□ -1.14
Usp4P35123 Cd200r4-203ENSMUST00000176819 1796 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Usp4P35123 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Usp4P35123 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Usp4P35123 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Usp4P35123 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Usp4P35123 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC7.96□□□□□ -1.14
Usp4P35123 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Usp4P35123 Snhg17-209ENSMUST00000186993 3144 ntBASIC7.96□□□□□ -1.14
Usp4P35123 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Usp4P35123 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC7.96□□□□□ -1.14
Usp4P35123 AC135669.2-201ENSMUST00000215636 4958 ntBASIC7.95□□□□□ -1.14
Usp4P35123 Gm44916-201ENSMUST00000208664 2194 ntBASIC7.95□□□□□ -1.14
Usp4P35123 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC7.95□□□□□ -1.14
Usp4P35123 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC7.95□□□□□ -1.14
Usp4P35123 Gm42898-201ENSMUST00000200370 3073 ntBASIC7.95□□□□□ -1.14
Usp4P35123 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Usp4P35123 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Usp4P35123 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Usp4P35123 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Usp4P35123 Trav12-1-201ENSMUST00000103650 344 ntAPPRIS ALT2 BASIC7.95□□□□□ -1.14
Usp4P35123 Gm23131-201ENSMUST00000104253 132 ntBASIC7.95□□□□□ -1.14
Usp4P35123 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC7.95□□□□□ -1.14
Usp4P35123 Gm13313-201ENSMUST00000118938 1084 ntBASIC7.95□□□□□ -1.14
Usp4P35123 Gm15741-201ENSMUST00000119401 754 ntBASIC7.95□□□□□ -1.14
Usp4P35123 Gm14824-201ENSMUST00000119421 737 ntBASIC7.95□□□□□ -1.14
Usp4P35123 Gm14450-201ENSMUST00000119984 240 ntBASIC7.95□□□□□ -1.14
Usp4P35123 Gm24382-201ENSMUST00000122698 107 ntBASIC7.95□□□□□ -1.14
Usp4P35123 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC7.95□□□□□ -1.14
Usp4P35123 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Usp4P35123 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Usp4P35123 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC7.95□□□□□ -1.14
Usp4P35123 Gm23079-201ENSMUST00000157847 117 ntBASIC7.95□□□□□ -1.14
Usp4P35123 Gm25266-201ENSMUST00000158521 304 ntBASIC7.95□□□□□ -1.14
Usp4P35123 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Usp4P35123 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC7.95□□□□□ -1.14
Usp4P35123 Vmn2r-ps52-201ENSMUST00000176211 612 ntBASIC7.95□□□□□ -1.14
Usp4P35123 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Usp4P35123 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC7.95□□□□□ -1.14
Usp4P35123 Gm37800-201ENSMUST00000192129 664 ntTSL 5 BASIC7.95□□□□□ -1.14
Usp4P35123 Gm37751-201ENSMUST00000192440 1198 ntBASIC7.95□□□□□ -1.14
Usp4P35123 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC7.95□□□□□ -1.14
Usp4P35123 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC7.95□□□□□ -1.14
Usp4P35123 Gm18422-201ENSMUST00000203663 1032 ntBASIC7.95□□□□□ -1.14
Usp4P35123 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC7.95□□□□□ -1.14
Usp4P35123 Gm18943-201ENSMUST00000207357 1216 ntBASIC7.95□□□□□ -1.14
Usp4P35123 Gm38430-201ENSMUST00000209888 1240 ntBASIC7.95□□□□□ -1.14
Usp4P35123 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC7.95□□□□□ -1.14
Usp4P35123 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Usp4P35123 Gm18043-201ENSMUST00000216741 739 ntBASIC7.95□□□□□ -1.14
Usp4P35123 CT009550.2-201ENSMUST00000228851 399 ntBASIC7.95□□□□□ -1.14
Usp4P35123 Gpihbp1-201ENSMUST00000023243 825 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Usp4P35123 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Usp4P35123 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Usp4P35123 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Usp4P35123 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Usp4P35123 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Usp4P35123 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms