Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Col2a1P28481 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col2a1P28481 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC8.33□□□□□ -1.08
Col2a1P28481 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col2a1P28481 AC122769.1-201ENSMUST00000226930 1714 ntBASIC8.33□□□□□ -1.08
Col2a1P28481 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Col2a1P28481 Gm37535-201ENSMUST00000194442 2365 ntBASIC8.33□□□□□ -1.08
Col2a1P28481 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col2a1P28481 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col2a1P28481 Adhfe1-203ENSMUST00000144177 3239 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col2a1P28481 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Col2a1P28481 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col2a1P28481 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Col2a1P28481 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC8.33□□□□□ -1.08
Col2a1P28481 Ttll7-201ENSMUST00000037942 7394 ntAPPRIS P2 TSL 5 BASIC8.33□□□□□ -1.08
Col2a1P28481 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC8.33□□□□□ -1.08
Col2a1P28481 Rapgef5-206ENSMUST00000222185 5508 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Col2a1P28481 Gm45657-201ENSMUST00000211318 1349 ntBASIC8.33□□□□□ -1.08
Col2a1P28481 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Col2a1P28481 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Col2a1P28481 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Col2a1P28481 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Col2a1P28481 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC8.32□□□□□ -1.08
Col2a1P28481 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Col2a1P28481 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Col2a1P28481 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Col2a1P28481 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Col2a1P28481 Gm6142-201ENSMUST00000120290 325 ntBASIC8.32□□□□□ -1.08
Col2a1P28481 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC8.32□□□□□ -1.08
Col2a1P28481 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col2a1P28481 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC8.32□□□□□ -1.08
Col2a1P28481 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC8.32□□□□□ -1.08
Col2a1P28481 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC8.32□□□□□ -1.08
Col2a1P28481 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC8.32□□□□□ -1.08
Col2a1P28481 Ighv1-29-201ENSMUST00000194116 342 ntBASIC8.32□□□□□ -1.08
Col2a1P28481 Gm43546-201ENSMUST00000196721 943 ntBASIC8.32□□□□□ -1.08
Col2a1P28481 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col2a1P28481 Gm42713-201ENSMUST00000202709 945 ntBASIC8.32□□□□□ -1.08
Col2a1P28481 Gm45136-201ENSMUST00000205793 943 ntBASIC8.32□□□□□ -1.08
Col2a1P28481 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC8.32□□□□□ -1.08
Col2a1P28481 CT009728.1-201ENSMUST00000225228 1050 ntBASIC8.32□□□□□ -1.08
Col2a1P28481 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Col2a1P28481 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col2a1P28481 Meis1-201ENSMUST00000068264 3196 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col2a1P28481 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col2a1P28481 Gm10744-201ENSMUST00000220184 2706 ntBASIC8.32□□□□□ -1.08
Col2a1P28481 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC8.32□□□□□ -1.08
Col2a1P28481 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC8.32□□□□□ -1.08
Col2a1P28481 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Col2a1P28481 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col2a1P28481 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col2a1P28481 C1qtnf7-201ENSMUST00000076939 3879 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col2a1P28481 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col2a1P28481 Fam168a-205ENSMUST00000207875 4077 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col2a1P28481 Ctnnd1-212ENSMUST00000111686 6061 ntTSL 5 BASIC8.32□□□□□ -1.08
Col2a1P28481 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col2a1P28481 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col2a1P28481 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col2a1P28481 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col2a1P28481 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC8.32□□□□□ -1.08
Col2a1P28481 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC8.32□□□□□ -1.08
Col2a1P28481 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col2a1P28481 Ing5-201ENSMUST00000027505 4533 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col2a1P28481 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col2a1P28481 Gm12187-201ENSMUST00000119584 1375 ntBASIC8.32□□□□□ -1.08
Col2a1P28481 Gm37496-201ENSMUST00000191930 2509 ntBASIC8.32□□□□□ -1.08
Col2a1P28481 Kmt2a-201ENSMUST00000002095 16461 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
Col2a1P28481 Cdh13-201ENSMUST00000117160 3785 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col2a1P28481 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col2a1P28481 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Col2a1P28481 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Col2a1P28481 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC8.32□□□□□ -1.08
Col2a1P28481 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col2a1P28481 Ebpl-201ENSMUST00000022494 10092 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col2a1P28481 Gm22781-201ENSMUST00000104083 137 ntBASIC8.32□□□□□ -1.08
Col2a1P28481 Gm13196-201ENSMUST00000118297 379 ntBASIC8.32□□□□□ -1.08
Col2a1P28481 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC8.32□□□□□ -1.08
Col2a1P28481 Gm14380-201ENSMUST00000122298 431 ntBASIC8.32□□□□□ -1.08
Col2a1P28481 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC8.32□□□□□ -1.08
Col2a1P28481 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col2a1P28481 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Col2a1P28481 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC8.32□□□□□ -1.08
Col2a1P28481 Gm2840-201ENSMUST00000048361 411 ntBASIC8.32□□□□□ -1.08
Col2a1P28481 Gm22865-201ENSMUST00000083949 214 ntBASIC8.32□□□□□ -1.08
Col2a1P28481 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col2a1P28481 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC8.32□□□□□ -1.08
Col2a1P28481 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col2a1P28481 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col2a1P28481 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col2a1P28481 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col2a1P28481 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col2a1P28481 AC154828.1-201ENSMUST00000220696 2810 ntBASIC8.31□□□□□ -1.08
Col2a1P28481 A330032B11Rik-201ENSMUST00000180609 1919 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col2a1P28481 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Col2a1P28481 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col2a1P28481 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col2a1P28481 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col2a1P28481 Tfap2b-201ENSMUST00000027059 5863 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col2a1P28481 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col2a1P28481 AC122426.2-201ENSMUST00000216522 2947 ntBASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms