Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
P20040 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC6.57□□□□□ -1.36
P20040 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
P20040 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
P20040 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
P20040 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
P20040 Gm37426-201ENSMUST00000195241 2470 ntBASIC6.57□□□□□ -1.36
P20040 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC6.57□□□□□ -1.36
P20040 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC6.57□□□□□ -1.36
P20040 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC6.57□□□□□ -1.36
P20040 Gm42996-201ENSMUST00000196116 1636 ntBASIC6.57□□□□□ -1.36
P20040 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC6.57□□□□□ -1.36
P20040 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
P20040 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
P20040 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC6.57□□□□□ -1.36
P20040 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC6.57□□□□□ -1.36
P20040 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
P20040 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
P20040 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
P20040 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
P20040 Gm7842-201ENSMUST00000217691 1379 ntBASIC6.57□□□□□ -1.36
P20040 Snhg17-209ENSMUST00000186993 3144 ntBASIC6.56□□□□□ -1.36
P20040 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
P20040 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
P20040 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC6.56□□□□□ -1.36
P20040 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC6.56□□□□□ -1.36
P20040 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
P20040 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
P20040 Gm38218-201ENSMUST00000193555 4689 ntBASIC6.56□□□□□ -1.36
P20040 Gm30698-201ENSMUST00000214789 3198 ntBASIC6.56□□□□□ -1.36
P20040 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
P20040 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
P20040 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
P20040 Gm43533-201ENSMUST00000202933 2936 ntBASIC6.56□□□□□ -1.36
P20040 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
P20040 Gm22022-201ENSMUST00000104355 127 ntBASIC6.56□□□□□ -1.36
P20040 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
P20040 Gm7091-201ENSMUST00000116438 586 ntBASIC6.56□□□□□ -1.36
P20040 Gm15000-201ENSMUST00000118275 1243 ntBASIC6.56□□□□□ -1.36
P20040 Gm13915-201ENSMUST00000119314 931 ntBASIC6.56□□□□□ -1.36
P20040 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
P20040 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
P20040 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC6.56□□□□□ -1.36
P20040 Gm15843-201ENSMUST00000146593 529 ntBASIC6.56□□□□□ -1.36
P20040 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC6.56□□□□□ -1.36
P20040 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC6.56□□□□□ -1.36
P20040 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
P20040 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
P20040 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
P20040 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
P20040 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
P20040 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
P20040 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC6.56□□□□□ -1.36
P20040 Mir8095-201ENSMUST00000185103 129 ntBASIC6.56□□□□□ -1.36
P20040 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
P20040 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
P20040 Gm43555-201ENSMUST00000196588 310 ntBASIC6.56□□□□□ -1.36
P20040 Gm8925-201ENSMUST00000197212 763 ntBASIC6.56□□□□□ -1.36
P20040 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC6.56□□□□□ -1.36
P20040 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC6.56□□□□□ -1.36
P20040 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC6.56□□□□□ -1.36
P20040 Gm8058-201ENSMUST00000217247 587 ntBASIC6.56□□□□□ -1.36
P20040 AC129537.1-202ENSMUST00000226619 430 ntBASIC6.56□□□□□ -1.36
P20040 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
P20040 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
P20040 Gm6054-201ENSMUST00000078052 378 ntBASIC6.56□□□□□ -1.36
P20040 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
P20040 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
P20040 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
P20040 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
P20040 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
P20040 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
P20040 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
P20040 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
P20040 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC6.55□□□□□ -1.36
P20040 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC6.55□□□□□ -1.36
P20040 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
P20040 Gm37090-201ENSMUST00000195694 4105 ntBASIC6.55□□□□□ -1.36
P20040 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
P20040 Gm43022-201ENSMUST00000197067 4268 ntBASIC6.55□□□□□ -1.36
P20040 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC6.55□□□□□ -1.36
P20040 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
P20040 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
P20040 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
P20040 AC124421.1-201ENSMUST00000219114 4154 ntBASIC6.55□□□□□ -1.36
P20040 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC6.55□□□□□ -1.36
P20040 Gm24195-201ENSMUST00000116804 137 ntBASIC6.55□□□□□ -1.36
P20040 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
P20040 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
P20040 Gm23079-201ENSMUST00000157847 117 ntBASIC6.55□□□□□ -1.36
P20040 Gm8164-201ENSMUST00000169120 1192 ntBASIC6.55□□□□□ -1.36
P20040 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
P20040 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC6.55□□□□□ -1.36
P20040 Gm37392-201ENSMUST00000192098 516 ntBASIC6.55□□□□□ -1.36
P20040 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
P20040 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
P20040 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
P20040 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC6.55□□□□□ -1.36
P20040 Gm45399-201ENSMUST00000209955 1016 ntBASIC6.55□□□□□ -1.36
P20040 Gm18972-201ENSMUST00000218873 630 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms