Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Cdx1P18111 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx1P18111 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx1P18111 Gm37525-201ENSMUST00000193499 2871 ntBASIC6.06□□□□□ -1.44
Cdx1P18111 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx1P18111 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx1P18111 Tex52-202ENSMUST00000130785 1424 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx1P18111 Brdt-202ENSMUST00000112677 1607 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx1P18111 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx1P18111 Gm36527-201ENSMUST00000195500 3029 ntBASIC6.06□□□□□ -1.44
Cdx1P18111 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
Cdx1P18111 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Cdx1P18111 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Cdx1P18111 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx1P18111 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.06□□□□□ -1.44
Cdx1P18111 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx1P18111 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Cdx1P18111 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx1P18111 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Cdx1P18111 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx1P18111 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx1P18111 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Cdx1P18111 Gm37127-201ENSMUST00000192924 3036 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 AC155234.1-201ENSMUST00000225610 2823 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 Gm1982-201ENSMUST00000188615 1887 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Cdx1P18111 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx1P18111 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Cdx1P18111 Gm28938-201ENSMUST00000187029 1495 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdx1P18111 Gm29399-202ENSMUST00000187292 1495 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdx1P18111 Gm29203-201ENSMUST00000187355 1495 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdx1P18111 Gm29027-202ENSMUST00000187571 1495 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdx1P18111 Gm28249-203ENSMUST00000190011 1495 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdx1P18111 Gm30045-202ENSMUST00000193438 1495 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdx1P18111 Gm32181-202ENSMUST00000194268 1495 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdx1P18111 Gm36345-202ENSMUST00000194949 1495 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdx1P18111 Gm31422-203ENSMUST00000195198 1495 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdx1P18111 Gm30705-203ENSMUST00000195660 1495 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdx1P18111 Pramef6-201ENSMUST00000081645 1487 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
Cdx1P18111 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx1P18111 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdx1P18111 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdx1P18111 Pilrb1-201ENSMUST00000110978 1020 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx1P18111 Rgs8-204ENSMUST00000111814 678 ntTSL 3 BASIC6.05□□□□□ -1.44
Cdx1P18111 Gm14056-201ENSMUST00000117198 642 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 Gm12123-201ENSMUST00000120348 472 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 Gm5883-201ENSMUST00000120735 495 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdx1P18111 Gm12320-201ENSMUST00000127333 1182 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx1P18111 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx1P18111 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx1P18111 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdx1P18111 Gm25721-201ENSMUST00000157496 171 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 Gm4302-201ENSMUST00000168769 927 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Cdx1P18111 Tmem147os-201ENSMUST00000180820 1276 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx1P18111 Gm27288-201ENSMUST00000184215 80 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 Gm27597-201ENSMUST00000184365 80 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 Gm27506-201ENSMUST00000184558 80 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx1P18111 Gm27529-201ENSMUST00000184975 80 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 Gm27907-201ENSMUST00000185101 80 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 Gm29416-202ENSMUST00000191328 1201 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdx1P18111 Ighv1-38-201ENSMUST00000192755 349 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 Gm43218-201ENSMUST00000196275 344 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Cdx1P18111 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC6.05□□□□□ -1.44
Cdx1P18111 Gm17835-201ENSMUST00000196870 499 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 Gm43837-201ENSMUST00000200306 668 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdx1P18111 Gm16273-201ENSMUST00000202238 268 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 Gm29977-201ENSMUST00000206804 724 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdx1P18111 Gm18292-201ENSMUST00000216673 919 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 AC102689.1-201ENSMUST00000220511 1090 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx1P18111 AC164294.1-201ENSMUST00000224682 688 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 AC131710.2-201ENSMUST00000226773 683 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx1P18111 Spag11a-201ENSMUST00000058955 436 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx1P18111 Fgfbp1-201ENSMUST00000061299 1161 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx1P18111 Gm26244-201ENSMUST00000083435 164 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 Tmem241-203ENSMUST00000092075 595 ntAPPRIS ALT2 TSL 3 BASIC6.05□□□□□ -1.44
Cdx1P18111 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 AC099612.1-201ENSMUST00000226318 1636 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 Gm45807-201ENSMUST00000209142 2874 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 Vmn2r96-202ENSMUST00000177244 1995 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Cdx1P18111 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx1P18111 Gm43876-201ENSMUST00000203831 3229 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Cdx1P18111 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Cdx1P18111 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Cdx1P18111 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Cdx1P18111 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx1P18111 Gm38070-201ENSMUST00000191850 6480 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 Gm37534-201ENSMUST00000194483 5222 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx1P18111 4930578I07Rik-201ENSMUST00000193416 1372 ntBASIC6.05□□□□□ -1.44
Cdx1P18111 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx1P18111 D130007C19Rik-201ENSMUST00000067277 1505 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 191.8 ms