Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC8.64□□□□□ -1.03
Col1a1P11087 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC8.64□□□□□ -1.03
Col1a1P11087 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC8.64□□□□□ -1.03
Col1a1P11087 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC8.64□□□□□ -1.03
Col1a1P11087 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC8.64□□□□□ -1.03
Col1a1P11087 Gm9285-201ENSMUST00000177691 697 ntBASIC8.64□□□□□ -1.03
Col1a1P11087 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC8.64□□□□□ -1.03
Col1a1P11087 Gm28140-201ENSMUST00000190148 1271 ntTSL 5 BASIC8.64□□□□□ -1.03
Col1a1P11087 Gm7452-201ENSMUST00000200764 788 ntBASIC8.64□□□□□ -1.03
Col1a1P11087 Olfr32-206ENSMUST00000215765 1241 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
Col1a1P11087 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC8.64□□□□□ -1.03
Col1a1P11087 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col1a1P11087 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Col1a1P11087 Olfr32-201ENSMUST00000099755 1016 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Col1a1P11087 Gm28651-202ENSMUST00000227968 2693 ntBASIC8.64□□□□□ -1.03
Col1a1P11087 Pnp-203ENSMUST00000048615 2942 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col1a1P11087 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Col1a1P11087 Nlrp12-201ENSMUST00000108653 6928 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Col1a1P11087 Cdh23-204ENSMUST00000105463 10991 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Col1a1P11087 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col1a1P11087 Zic4-201ENSMUST00000066384 3891 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Col1a1P11087 Gm37080-201ENSMUST00000194804 2404 ntBASIC8.64□□□□□ -1.03
Col1a1P11087 Spag9-205ENSMUST00000103168 6840 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Col1a1P11087 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col1a1P11087 Casr-201ENSMUST00000063597 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col1a1P11087 9930022D16Rik-201ENSMUST00000055404 2706 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col1a1P11087 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col1a1P11087 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Col1a1P11087 AC130831.1-201ENSMUST00000224546 1474 ntBASIC8.64□□□□□ -1.03
Col1a1P11087 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col1a1P11087 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
Col1a1P11087 Cdc6-202ENSMUST00000093937 2559 ntAPPRIS P4 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col1a1P11087 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col1a1P11087 Sorbs1-211ENSMUST00000224667 4313 ntAPPRIS ALT2 BASIC8.64□□□□□ -1.03
Col1a1P11087 Mir680-1-201ENSMUST00000102257 109 ntBASIC8.64□□□□□ -1.03
Col1a1P11087 Gm22256-201ENSMUST00000102291 107 ntBASIC8.64□□□□□ -1.03
Col1a1P11087 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Col1a1P11087 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC8.64□□□□□ -1.03
Col1a1P11087 Gm14116-201ENSMUST00000117733 805 ntBASIC8.64□□□□□ -1.03
Col1a1P11087 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC8.64□□□□□ -1.03
Col1a1P11087 Gm16016-201ENSMUST00000120831 550 ntBASIC8.64□□□□□ -1.03
Col1a1P11087 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Col1a1P11087 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Col1a1P11087 Mir6911-201ENSMUST00000184241 69 ntBASIC8.64□□□□□ -1.03
Col1a1P11087 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Col1a1P11087 Gm412-201ENSMUST00000193360 948 ntBASIC8.64□□□□□ -1.03
Col1a1P11087 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC8.64□□□□□ -1.03
Col1a1P11087 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC8.64□□□□□ -1.03
Col1a1P11087 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC8.64□□□□□ -1.03
Col1a1P11087 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC8.64□□□□□ -1.03
Col1a1P11087 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col1a1P11087 AC163667.1-201ENSMUST00000225201 1289 ntBASIC8.64□□□□□ -1.03
Col1a1P11087 AC151730.1-201ENSMUST00000226106 448 ntBASIC8.64□□□□□ -1.03
Col1a1P11087 AC154380.1-201ENSMUST00000226804 720 ntBASIC8.64□□□□□ -1.03
Col1a1P11087 AC165155.1-201ENSMUST00000228932 445 ntBASIC8.64□□□□□ -1.03
Col1a1P11087 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC8.64□□□□□ -1.03
Col1a1P11087 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Col1a1P11087 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Col1a1P11087 Gm28581-201ENSMUST00000186086 2177 ntBASIC8.63□□□□□ -1.03
Col1a1P11087 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
Col1a1P11087 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Col1a1P11087 Gm28370-201ENSMUST00000185303 3375 ntTSL 5 BASIC8.63□□□□□ -1.03
Col1a1P11087 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC8.63□□□□□ -1.03
Col1a1P11087 Baz2a-203ENSMUST00000217851 8385 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Col1a1P11087 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Col1a1P11087 Wdr44-202ENSMUST00000101670 4002 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Col1a1P11087 Gm20731-201ENSMUST00000193462 2288 ntBASIC8.63□□□□□ -1.03
Col1a1P11087 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Col1a1P11087 2010111I01Rik-202ENSMUST00000091560 3509 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Col1a1P11087 AC122769.1-201ENSMUST00000226930 1714 ntBASIC8.63□□□□□ -1.03
Col1a1P11087 Gm38331-201ENSMUST00000195719 2671 ntBASIC8.63□□□□□ -1.03
Col1a1P11087 Gm37535-201ENSMUST00000194442 2365 ntBASIC8.63□□□□□ -1.03
Col1a1P11087 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Col1a1P11087 Cd300lg-203ENSMUST00000107164 2737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Col1a1P11087 Polq-201ENSMUST00000054034 8552 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Col1a1P11087 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Col1a1P11087 Gm44116-201ENSMUST00000204269 1525 ntBASIC8.63□□□□□ -1.03
Col1a1P11087 Tecpr2-201ENSMUST00000165978 7778 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Col1a1P11087 AU015836-202ENSMUST00000121565 2997 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Col1a1P11087 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Col1a1P11087 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Col1a1P11087 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Col1a1P11087 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Col1a1P11087 Zkscan1-203ENSMUST00000110962 4843 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Col1a1P11087 Ttll7-201ENSMUST00000037942 7394 ntAPPRIS P2 TSL 5 BASIC8.63□□□□□ -1.03
Col1a1P11087 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Col1a1P11087 Gm23768-201ENSMUST00000104440 131 ntBASIC8.63□□□□□ -1.03
Col1a1P11087 Gm12573-201ENSMUST00000118158 286 ntBASIC8.63□□□□□ -1.03
Col1a1P11087 Gm5601-201ENSMUST00000118909 972 ntBASIC8.63□□□□□ -1.03
Col1a1P11087 Gm12451-201ENSMUST00000121636 633 ntBASIC8.63□□□□□ -1.03
Col1a1P11087 Gm9359-201ENSMUST00000163721 1221 ntBASIC8.63□□□□□ -1.03
Col1a1P11087 Gm7694-201ENSMUST00000179801 3827 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Col1a1P11087 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Col1a1P11087 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC8.63□□□□□ -1.03
Col1a1P11087 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Col1a1P11087 Gm8924-201ENSMUST00000197405 1132 ntBASIC8.63□□□□□ -1.03
Col1a1P11087 Gm43656-201ENSMUST00000197882 434 ntBASIC8.63□□□□□ -1.03
Col1a1P11087 Gm21040-201ENSMUST00000199493 1132 ntBASIC8.63□□□□□ -1.03
Col1a1P11087 Gm2089-201ENSMUST00000218294 479 ntBASIC8.63□□□□□ -1.03
Col1a1P11087 AC151904.2-201ENSMUST00000218683 1177 ntBASIC8.63□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms