Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm22202-201ENSMUST00000158608 311 ntBASIC5.36□□□□□ -1.55
TcraP01849 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
TcraP01849 Scgb1b9-ps-201ENSMUST00000191567 266 ntBASIC5.36□□□□□ -1.55
TcraP01849 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC5.36□□□□□ -1.55
TcraP01849 Gm42525-201ENSMUST00000196257 527 ntBASIC5.36□□□□□ -1.55
TcraP01849 Gm5723-201ENSMUST00000203096 432 ntBASIC5.36□□□□□ -1.55
TcraP01849 Gm44203-201ENSMUST00000203134 307 ntBASIC5.36□□□□□ -1.55
TcraP01849 Gm7424-201ENSMUST00000206919 902 ntBASIC5.36□□□□□ -1.55
TcraP01849 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC5.36□□□□□ -1.55
TcraP01849 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC5.36□□□□□ -1.55
TcraP01849 AC155644.1-201ENSMUST00000218527 890 ntTSL 5 BASIC5.36□□□□□ -1.55
TcraP01849 Gm18972-201ENSMUST00000218873 630 ntBASIC5.36□□□□□ -1.55
TcraP01849 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC5.36□□□□□ -1.55
TcraP01849 AC129975.2-201ENSMUST00000223705 775 ntBASIC5.36□□□□□ -1.55
TcraP01849 Tssk4-206ENSMUST00000228041 1217 ntBASIC5.36□□□□□ -1.55
TcraP01849 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TcraP01849 2410137M14Rik-201ENSMUST00000039846 865 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TcraP01849 Gm5619-201ENSMUST00000071172 760 ntBASIC5.36□□□□□ -1.55
TcraP01849 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TcraP01849 Olfr1320-201ENSMUST00000096449 960 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TcraP01849 1700011H14Rik-201ENSMUST00000022398 1349 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TcraP01849 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TcraP01849 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TcraP01849 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TcraP01849 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
TcraP01849 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
TcraP01849 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TcraP01849 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TcraP01849 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TcraP01849 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TcraP01849 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
TcraP01849 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
TcraP01849 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
TcraP01849 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
TcraP01849 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TcraP01849 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TcraP01849 CT009711.1-201ENSMUST00000223992 3040 ntBASIC5.36□□□□□ -1.55
TcraP01849 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TcraP01849 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
TcraP01849 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TcraP01849 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TcraP01849 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TcraP01849 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
TcraP01849 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
TcraP01849 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TcraP01849 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TcraP01849 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TcraP01849 AC152922.2-201ENSMUST00000213353 3879 ntBASIC5.35□□□□□ -1.55
TcraP01849 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TcraP01849 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TcraP01849 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TcraP01849 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
TcraP01849 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC5.35□□□□□ -1.55
TcraP01849 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TcraP01849 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TcraP01849 Olfr212-202ENSMUST00000218028 2291 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
TcraP01849 Keg1-201ENSMUST00000025598 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TcraP01849 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
TcraP01849 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
TcraP01849 CT025675.1-201ENSMUST00000228171 1567 ntBASIC5.35□□□□□ -1.55
TcraP01849 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
TcraP01849 4933405D12Rik-201ENSMUST00000180557 1383 ntTSL 2 BASIC5.35□□□□□ -1.55
TcraP01849 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
TcraP01849 Gm6350-201ENSMUST00000195099 1339 ntBASIC5.35□□□□□ -1.55
TcraP01849 Gm24938-201ENSMUST00000102225 110 ntBASIC5.35□□□□□ -1.55
TcraP01849 Gm26344-201ENSMUST00000104553 132 ntBASIC5.35□□□□□ -1.55
TcraP01849 Gm23840-201ENSMUST00000116950 97 ntBASIC5.35□□□□□ -1.55
TcraP01849 Gm12460-201ENSMUST00000117147 357 ntBASIC5.35□□□□□ -1.55
TcraP01849 Gm9164-201ENSMUST00000118700 1014 ntBASIC5.35□□□□□ -1.55
TcraP01849 Gm14450-201ENSMUST00000119984 240 ntBASIC5.35□□□□□ -1.55
TcraP01849 Gm12692-201ENSMUST00000121092 546 ntBASIC5.35□□□□□ -1.55
TcraP01849 Gm11765-201ENSMUST00000121173 1205 ntBASIC5.35□□□□□ -1.55
TcraP01849 Olfr268-ps1-201ENSMUST00000121395 945 ntBASIC5.35□□□□□ -1.55
TcraP01849 Bambi-ps1-201ENSMUST00000121525 592 ntBASIC5.35□□□□□ -1.55
TcraP01849 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC5.35□□□□□ -1.55
TcraP01849 Gm13536-201ENSMUST00000132913 766 ntTSL 2 BASIC5.35□□□□□ -1.55
TcraP01849 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TcraP01849 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TcraP01849 E130215H24Rik-201ENSMUST00000145525 939 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TcraP01849 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC5.35□□□□□ -1.55
TcraP01849 Gm20529-201ENSMUST00000173683 203 ntTSL 5 BASIC5.35□□□□□ -1.55
TcraP01849 Gm20491-201ENSMUST00000173765 1241 ntBASIC5.35□□□□□ -1.55
TcraP01849 Gm20406-201ENSMUST00000173993 423 ntTSL 3 BASIC5.35□□□□□ -1.55
TcraP01849 Gm24083-201ENSMUST00000175174 120 ntBASIC5.35□□□□□ -1.55
TcraP01849 Gm19815-201ENSMUST00000175818 335 ntBASIC5.35□□□□□ -1.55
TcraP01849 Gm25190-201ENSMUST00000176664 95 ntBASIC5.35□□□□□ -1.55
TcraP01849 Gm26619-201ENSMUST00000180396 1073 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TcraP01849 Gm26784-201ENSMUST00000181666 410 ntBASIC5.35□□□□□ -1.55
TcraP01849 Gm28609-201ENSMUST00000186515 463 ntTSL 3 BASIC5.35□□□□□ -1.55
TcraP01849 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TcraP01849 Gm28401-202ENSMUST00000190769 550 ntTSL 5 BASIC5.35□□□□□ -1.55
TcraP01849 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC5.35□□□□□ -1.55
TcraP01849 Gm43471-201ENSMUST00000197550 467 ntBASIC5.35□□□□□ -1.55
TcraP01849 Iglc1-201ENSMUST00000200568 454 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
TcraP01849 Gm17768-201ENSMUST00000201257 378 ntTSL 5 BASIC5.35□□□□□ -1.55
TcraP01849 Gm18995-201ENSMUST00000202981 520 ntBASIC5.35□□□□□ -1.55
TcraP01849 Gm45625-201ENSMUST00000209412 650 ntTSL 5 BASIC5.35□□□□□ -1.55
TcraP01849 2310003N18Rik-201ENSMUST00000215655 458 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TcraP01849 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC5.35□□□□□ -1.55
TcraP01849 AC163041.2-201ENSMUST00000223082 573 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms