Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Gm37520-201ENSMUST00000194883 2672 ntBASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Gm23323-201ENSMUST00000104471 133 ntBASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Gm14645-201ENSMUST00000118597 417 ntBASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Gm12123-201ENSMUST00000120348 472 ntBASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Gm14380-201ENSMUST00000122298 431 ntBASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Zfp113-202ENSMUST00000132318 488 ntTSL 3 BASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Mir6239-201ENSMUST00000183564 105 ntBASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Gm29008-201ENSMUST00000189387 298 ntBASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Gm44356-201ENSMUST00000196731 111 ntBASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Gm18690-201ENSMUST00000204488 985 ntBASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Gm6993-201ENSMUST00000219110 210 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 AC154382.1-201ENSMUST00000220958 1282 ntBASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 AC162183.1-201ENSMUST00000224843 472 ntBASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC9.38□□□□□ -0.91
Chmp4bQ9D8B3 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Gm15665-201ENSMUST00000119116 847 ntBASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Gm4835-201ENSMUST00000155839 972 ntBASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Gm8046-201ENSMUST00000172151 616 ntBASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Gm28728-201ENSMUST00000189087 405 ntBASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Gm43694-201ENSMUST00000200773 1119 ntBASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Gm42887-201ENSMUST00000202469 1119 ntBASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Gm34583-203ENSMUST00000202586 454 ntBASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 AC158531.2-201ENSMUST00000224264 473 ntBASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 CT009728.1-201ENSMUST00000225228 1050 ntBASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Olfr890-201ENSMUST00000079804 945 ntBASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Mir24-2-201ENSMUST00000083607 107 ntBASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Gm7265-201ENSMUST00000192735 3502 ntBASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Gm37278-201ENSMUST00000191619 2872 ntBASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Chmp4bQ9D8B3 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 AC159193.3-201ENSMUST00000221902 2622 ntBASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Gm43747-201ENSMUST00000201412 1330 ntBASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Gm43099-201ENSMUST00000198943 5241 ntBASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Gm14053-201ENSMUST00000121662 470 ntBASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Gm24011-201ENSMUST00000157732 268 ntBASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC9.36□□□□□ -0.91
Chmp4bQ9D8B3 Gm18131-201ENSMUST00000199241 449 ntBASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms