Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm4918-201ENSMUST00000119420 1084 ntBASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Gm12993-201ENSMUST00000119900 479 ntBASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Gm12642-201ENSMUST00000121098 876 ntBASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Gm12967-201ENSMUST00000122147 289 ntBASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Mir8099-2-201ENSMUST00000183568 127 ntBASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Mir8099-1-201ENSMUST00000184238 127 ntBASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Gm29145-201ENSMUST00000189914 456 ntBASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Gm18428-201ENSMUST00000194986 791 ntBASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Gm8921-201ENSMUST00000204306 649 ntBASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Olfr1422-ps1-201ENSMUST00000208076 743 ntBASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Gm45319-201ENSMUST00000210220 318 ntBASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Gm3011-201ENSMUST00000215669 582 ntBASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Gm4800-201ENSMUST00000215776 1266 ntBASIC8.37□□□□□ -1.07
Smc1aQ9CU62 AC153961.1-201ENSMUST00000217760 385 ntBASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Gm4796-201ENSMUST00000219802 624 ntBASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 AC154838.3-201ENSMUST00000228876 965 ntBASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Olfr433-202ENSMUST00000214690 2968 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 AC161884.1-201ENSMUST00000225436 2174 ntBASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Gm18701-201ENSMUST00000188281 1536 ntBASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Gm25546-201ENSMUST00000103977 132 ntBASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Gm25916-201ENSMUST00000104263 131 ntBASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Gm11649-201ENSMUST00000118214 375 ntBASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC8.36□□□□□ -1.07
Smc1aQ9CU62 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Gm12265-201ENSMUST00000139025 468 ntTSL 2 BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Gm26357-201ENSMUST00000158218 115 ntBASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Gm9141-201ENSMUST00000159355 1007 ntBASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Gm7512-201ENSMUST00000195217 1170 ntBASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Gm44892-201ENSMUST00000208595 488 ntBASIC8.36□□□□□ -1.07
Smc1aQ9CU62 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 AC129537.1-202ENSMUST00000226619 430 ntBASIC8.36□□□□□ -1.07
Smc1aQ9CU62 AC131029.2-203ENSMUST00000228116 1244 ntBASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 AC166341.5-201ENSMUST00000222206 1400 ntBASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Gm37067-201ENSMUST00000195730 1628 ntBASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Smc1aQ9CU62 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Smc1aQ9CU62 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Vmn2r41-201ENSMUST00000168807 3617 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Cav1-202ENSMUST00000115453 2746 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Gm19028-201ENSMUST00000189614 1873 ntBASIC8.35□□□□□ -1.07
Smc1aQ9CU62 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms