Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC6.98□□□□□ -1.29
Use1Q9CQ56 Mir6340-201ENSMUST00000183857 119 ntBASIC6.98□□□□□ -1.29
Use1Q9CQ56 Scgb1b25-ps-201ENSMUST00000186419 415 ntBASIC6.98□□□□□ -1.29
Use1Q9CQ56 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC6.98□□□□□ -1.29
Use1Q9CQ56 Wars2-205ENSMUST00000198044 403 ntTSL 3 BASIC6.98□□□□□ -1.29
Use1Q9CQ56 Gm42489-201ENSMUST00000198964 669 ntBASIC6.98□□□□□ -1.29
Use1Q9CQ56 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC6.98□□□□□ -1.29
Use1Q9CQ56 Olfr214-202ENSMUST00000203867 1255 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
Use1Q9CQ56 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.98□□□□□ -1.29
Use1Q9CQ56 Gm18378-201ENSMUST00000216245 628 ntBASIC6.98□□□□□ -1.29
Use1Q9CQ56 Gm40853-201ENSMUST00000221342 582 ntBASIC6.98□□□□□ -1.29
Use1Q9CQ56 Gm9255-201ENSMUST00000223225 581 ntBASIC6.98□□□□□ -1.29
Use1Q9CQ56 AC154785.1-201ENSMUST00000223280 572 ntBASIC6.98□□□□□ -1.29
Use1Q9CQ56 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Use1Q9CQ56 Lyrm2-201ENSMUST00000062802 465 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Use1Q9CQ56 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
Use1Q9CQ56 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Use1Q9CQ56 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Use1Q9CQ56 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Use1Q9CQ56 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Use1Q9CQ56 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC6.98□□□□□ -1.29
Use1Q9CQ56 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Use1Q9CQ56 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC6.98□□□□□ -1.29
Use1Q9CQ56 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC6.98□□□□□ -1.29
Use1Q9CQ56 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Use1Q9CQ56 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Use1Q9CQ56 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Use1Q9CQ56 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Use1Q9CQ56 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Use1Q9CQ56 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Use1Q9CQ56 Gm45221-201ENSMUST00000207822 2272 ntBASIC6.98□□□□□ -1.29
Use1Q9CQ56 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC6.98□□□□□ -1.29
Use1Q9CQ56 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC6.98□□□□□ -1.29
Use1Q9CQ56 Gm8836-201ENSMUST00000198196 1348 ntBASIC6.98□□□□□ -1.29
Use1Q9CQ56 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Tmem27-202ENSMUST00000112280 1389 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Gm42568-201ENSMUST00000195639 1841 ntBASIC6.97□□□□□ -1.29
Use1Q9CQ56 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Gm13160-201ENSMUST00000118441 627 ntBASIC6.97□□□□□ -1.29
Use1Q9CQ56 Gm14612-201ENSMUST00000121522 881 ntBASIC6.97□□□□□ -1.29
Use1Q9CQ56 Gm16407-201ENSMUST00000122134 567 ntBASIC6.97□□□□□ -1.29
Use1Q9CQ56 Trav8-2-201ENSMUST00000130122 337 ntBASIC6.97□□□□□ -1.29
Use1Q9CQ56 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Gm26357-201ENSMUST00000158218 115 ntBASIC6.97□□□□□ -1.29
Use1Q9CQ56 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Scgb2b20-201ENSMUST00000179248 523 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Gm4891-201ENSMUST00000182279 912 ntBASIC6.97□□□□□ -1.29
Use1Q9CQ56 Gm27595-201ENSMUST00000184579 112 ntBASIC6.97□□□□□ -1.29
Use1Q9CQ56 Scgb2b18-201ENSMUST00000186529 523 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Scgb2b11-201ENSMUST00000188293 523 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Gm29739-201ENSMUST00000191760 529 ntBASIC6.97□□□□□ -1.29
Use1Q9CQ56 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Gm18690-201ENSMUST00000204488 985 ntBASIC6.97□□□□□ -1.29
Use1Q9CQ56 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC6.97□□□□□ -1.29
Use1Q9CQ56 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC6.97□□□□□ -1.29
Use1Q9CQ56 AV026068-225ENSMUST00000225042 490 ntBASIC6.97□□□□□ -1.29
Use1Q9CQ56 AC134414.1-201ENSMUST00000228499 1221 ntBASIC6.97□□□□□ -1.29
Use1Q9CQ56 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Tmem225-201ENSMUST00000046333 993 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Gm25926-201ENSMUST00000082899 160 ntBASIC6.97□□□□□ -1.29
Use1Q9CQ56 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Gm10805-201ENSMUST00000099710 399 ntBASIC6.97□□□□□ -1.29
Use1Q9CQ56 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Gm28651-202ENSMUST00000227968 2693 ntBASIC6.97□□□□□ -1.29
Use1Q9CQ56 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Use1Q9CQ56 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC6.97□□□□□ -1.29
Use1Q9CQ56 AC144772.2-201ENSMUST00000228830 2859 ntBASIC6.97□□□□□ -1.29
Use1Q9CQ56 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
Use1Q9CQ56 Gm26831-201ENSMUST00000181458 1380 ntBASIC6.96□□□□□ -1.29
Use1Q9CQ56 Gm37548-201ENSMUST00000194519 3814 ntBASIC6.96□□□□□ -1.29
Use1Q9CQ56 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Use1Q9CQ56 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Use1Q9CQ56 Parp11-203ENSMUST00000112193 1725 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Use1Q9CQ56 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms