Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm12687-201ENSMUST00000119752 706 ntBASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm15780-201ENSMUST00000121283 935 ntBASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm24139-201ENSMUST00000122780 288 ntBASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm24782-201ENSMUST00000157641 132 ntBASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm17235-201ENSMUST00000169128 964 ntBASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm9381-201ENSMUST00000182285 1012 ntBASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm29513-201ENSMUST00000185741 202 ntBASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm8506-201ENSMUST00000186661 829 ntBASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm28142-201ENSMUST00000186899 698 ntBASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm29474-201ENSMUST00000187688 379 ntBASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm28396-201ENSMUST00000190309 379 ntBASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm37934-201ENSMUST00000192902 402 ntBASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm37439-201ENSMUST00000193150 856 ntBASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm42804-201ENSMUST00000199701 178 ntBASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm44688-201ENSMUST00000209083 537 ntBASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm17950-201ENSMUST00000214617 646 ntBASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm29807-201ENSMUST00000220161 372 ntBASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Vmn1r41-204ENSMUST00000227039 985 ntBASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 AC122397.3-201ENSMUST00000227097 527 ntBASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 AC136376.1-201ENSMUST00000228496 950 ntBASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Slc29a3-202ENSMUST00000119595 3123 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm26792-201ENSMUST00000180538 2799 ntTSL 5 BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Celf2-223ENSMUST00000182851 3587 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Dync2h1-202ENSMUST00000139115 2892 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Vipas39-201ENSMUST00000021426 2509 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm9597-202ENSMUST00000227632 1387 ntBASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Prr14-202ENSMUST00000106292 2175 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Pkp4-203ENSMUST00000112577 4222 ntTSL 5 BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm13302-201ENSMUST00000119405 1849 ntBASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Fmr1os-201ENSMUST00000181533 2743 ntTSL 2 BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 CT009515.4-201ENSMUST00000228165 1494 ntBASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gja1-206ENSMUST00000220069 3182 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Ttf2-201ENSMUST00000076941 4541 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm37675-201ENSMUST00000192303 2847 ntBASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm44986-201ENSMUST00000206292 2829 ntBASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Pcdhb15-201ENSMUST00000050034 2801 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm13081-201ENSMUST00000121527 5599 ntBASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Gm37314-201ENSMUST00000193545 2685 ntBASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 B4galnt3-201ENSMUST00000057283 3677 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Il1rap-203ENSMUST00000166294 3200 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Cd101-202ENSMUST00000167086 3223 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Naalad2-204ENSMUST00000166825 2799 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Nkx6-1Q99MA9 Wrn-204ENSMUST00000211498 4856 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Olfr1395-202ENSMUST00000203377 2883 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Gm45807-201ENSMUST00000209142 2874 ntBASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Gm37891-201ENSMUST00000195585 1326 ntBASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Fut10-203ENSMUST00000161502 3527 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Prox2-202ENSMUST00000177289 3066 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Gm12258-201ENSMUST00000093768 2524 ntBASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Gm27013-202ENSMUST00000205067 1436 ntBASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Gm37066-201ENSMUST00000192713 2061 ntBASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Zfp248-201ENSMUST00000069292 3683 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 E130018O15Rik-201ENSMUST00000069741 3776 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 1700001L19Rik-201ENSMUST00000022007 1826 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Clip4-201ENSMUST00000024854 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Gys2-201ENSMUST00000032371 2657 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Bves-201ENSMUST00000095715 4368 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 CU024890.1-201ENSMUST00000221361 2019 ntBASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Gm24048-201ENSMUST00000102411 106 ntBASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 n-R5s172-201ENSMUST00000104508 114 ntBASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
Nkx6-1Q99MA9 Gm15090-201ENSMUST00000118787 1196 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms