Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc38Q8CDN8 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Ccdc38Q8CDN8 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc38Q8CDN8 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc38Q8CDN8 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc38Q8CDN8 Gm13854-201ENSMUST00000121183 1679 ntBASIC8.33□□□□□ -1.08
Ccdc38Q8CDN8 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Ccdc38Q8CDN8 Gm42678-201ENSMUST00000197163 2221 ntBASIC8.33□□□□□ -1.08
Ccdc38Q8CDN8 Gm37618-201ENSMUST00000192891 3075 ntBASIC8.33□□□□□ -1.08
Ccdc38Q8CDN8 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc38Q8CDN8 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc38Q8CDN8 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC8.33□□□□□ -1.08
Ccdc38Q8CDN8 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC8.33□□□□□ -1.08
Ccdc38Q8CDN8 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc38Q8CDN8 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Gm42994-201ENSMUST00000195964 2549 ntBASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Gm11833-201ENSMUST00000118393 853 ntBASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Gm8662-201ENSMUST00000118644 574 ntBASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Gm13313-201ENSMUST00000118938 1084 ntBASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Gm11188-201ENSMUST00000122382 388 ntBASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Ankrd55-204ENSMUST00000168684 1005 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Apol11a-201ENSMUST00000172191 1132 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Mir3471-2-201ENSMUST00000174896 102 ntBASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Gm42977-201ENSMUST00000197497 144 ntBASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Gm7478-201ENSMUST00000201054 581 ntBASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Gm7565-201ENSMUST00000203611 623 ntBASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Gm18207-201ENSMUST00000205486 526 ntBASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Gm45432-201ENSMUST00000210391 416 ntBASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Gm40853-201ENSMUST00000221342 582 ntBASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Gm9255-201ENSMUST00000223225 581 ntBASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Gm37090-201ENSMUST00000195694 4105 ntBASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc38Q8CDN8 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Gm12365-201ENSMUST00000117931 568 ntBASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Gm11809-201ENSMUST00000120923 950 ntBASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Gm12593-201ENSMUST00000120981 743 ntBASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Gm15251-201ENSMUST00000177947 883 ntBASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Gm27158-201ENSMUST00000183813 238 ntBASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Gm7436-201ENSMUST00000187229 391 ntBASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Gstp3-202ENSMUST00000189808 708 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Gm7631-201ENSMUST00000196935 1100 ntBASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Gm43842-201ENSMUST00000202890 2982 ntBASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Il15-203ENSMUST00000209573 1164 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Gm4972-201ENSMUST00000211108 1254 ntBASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Gm8058-201ENSMUST00000217247 587 ntBASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 AC133189.3-201ENSMUST00000226269 878 ntBASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ccdc38Q8CDN8 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms