Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 AC133948.1-201ENSMUST00000214867 599 ntTSL 3 BASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 AC069562.1-201ENSMUST00000224206 434 ntBASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 AC118249.1-201ENSMUST00000224822 608 ntBASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 AC122309.1-201ENSMUST00000226945 421 ntBASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 AC116487.1-201ENSMUST00000227033 339 ntBASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 Tmem225-201ENSMUST00000046333 993 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 Gm42462-201ENSMUST00000196543 1363 ntBASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 Gm14035-201ENSMUST00000117596 1475 ntBASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 Gm42969-201ENSMUST00000199858 3631 ntBASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 Gm37410-201ENSMUST00000193623 3039 ntBASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 Gm42678-201ENSMUST00000197163 2221 ntBASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
Nhlrc3Q8CCH2 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Dpep2-202ENSMUST00000117555 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Olfr353-201ENSMUST00000100149 936 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Gm11987-201ENSMUST00000118524 381 ntBASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Gm11343-201ENSMUST00000120579 599 ntBASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Gm12593-201ENSMUST00000120981 743 ntBASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Gm11933-201ENSMUST00000121550 375 ntBASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Gm8865-201ENSMUST00000125697 430 ntBASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Gm24011-201ENSMUST00000157732 268 ntBASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Gm26436-201ENSMUST00000180325 132 ntBASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Mir6340-201ENSMUST00000183857 119 ntBASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Gm14214-201ENSMUST00000184654 678 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Gm28677-202ENSMUST00000186904 615 ntBASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Olfr737-ps1-201ENSMUST00000205382 283 ntBASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Gm45394-201ENSMUST00000209240 1175 ntBASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Gm33096-201ENSMUST00000210189 493 ntBASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Gm4275-203ENSMUST00000210214 1298 ntTSL 5 BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 AC151904.2-201ENSMUST00000218683 1177 ntBASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Gm40421-201ENSMUST00000218991 658 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 AC153936.1-201ENSMUST00000219874 395 ntBASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 AC122539.2-201ENSMUST00000220207 404 ntBASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Gm4825-201ENSMUST00000079690 408 ntBASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Olfr641-201ENSMUST00000098183 939 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 AC166341.5-201ENSMUST00000222206 1400 ntBASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.24□□□□□ -1.41
Nhlrc3Q8CCH2 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nhlrc3Q8CCH2 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Nhlrc3Q8CCH2 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Nhlrc3Q8CCH2 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Nhlrc3Q8CCH2 Gm6640-201ENSMUST00000120629 1587 ntBASIC6.23□□□□□ -1.41
Nhlrc3Q8CCH2 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Nhlrc3Q8CCH2 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Nhlrc3Q8CCH2 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nhlrc3Q8CCH2 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms