Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Gm37206-201ENSMUST00000195512 3069 ntBASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Gm45201-201ENSMUST00000207187 2679 ntBASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Gm9866-206ENSMUST00000222838 1580 ntTSL 5 BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Gm43196-201ENSMUST00000201762 2114 ntBASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Gm12106-201ENSMUST00000116006 1200 ntBASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Gm6491-201ENSMUST00000118273 990 ntBASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Gm13680-201ENSMUST00000119790 793 ntBASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 n-R5s115-201ENSMUST00000179019 119 ntBASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Gm6100-201ENSMUST00000180253 403 ntBASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Gm5787-201ENSMUST00000183049 1038 ntBASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Gm27866-201ENSMUST00000184459 171 ntBASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Gm29273-201ENSMUST00000188880 262 ntBASIC8.74□□□□□ -1.01
Vps53Q8CCB4 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Gm8077-201ENSMUST00000209221 1024 ntBASIC8.74□□□□□ -1.01
Vps53Q8CCB4 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 AC138604.2-201ENSMUST00000226620 921 ntBASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 n-R5s193-201ENSMUST00000082864 109 ntBASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Gm21781-201ENSMUST00000178920 4838 ntBASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Vps53Q8CCB4 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Gm44777-201ENSMUST00000205941 4052 ntBASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Gm8164-201ENSMUST00000169120 1192 ntBASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Ighv1-30-201ENSMUST00000194082 349 ntBASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Gm43226-201ENSMUST00000202438 259 ntBASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Gm43371-201ENSMUST00000202838 1031 ntBASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 AC161537.1-202ENSMUST00000228450 868 ntBASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Mir135b-201ENSMUST00000083501 97 ntBASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 CT025619.3-201ENSMUST00000216299 3267 ntBASIC8.73□□□□□ -1.01
Vps53Q8CCB4 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 96.7 ms