Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Atg4aQ8C9S8 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.98
Atg4aQ8C9S8 n-R5s72-201ENSMUST00000104518 119 ntBASIC8.9□□□□□ -0.98
Atg4aQ8C9S8 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Atg4aQ8C9S8 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC8.9□□□□□ -0.98
Atg4aQ8C9S8 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC8.9□□□□□ -0.98
Atg4aQ8C9S8 Gm23222-201ENSMUST00000158117 76 ntBASIC8.9□□□□□ -0.98
Atg4aQ8C9S8 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC8.9□□□□□ -0.98
Atg4aQ8C9S8 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
Atg4aQ8C9S8 Gm27019-201ENSMUST00000183056 404 ntBASIC8.9□□□□□ -0.98
Atg4aQ8C9S8 Gm27373-201ENSMUST00000184017 184 ntBASIC8.9□□□□□ -0.98
Atg4aQ8C9S8 AC160338.3-201ENSMUST00000214836 384 ntBASIC8.9□□□□□ -0.98
Atg4aQ8C9S8 CT009556.4-201ENSMUST00000227092 200 ntBASIC8.9□□□□□ -0.98
Atg4aQ8C9S8 AC107453.3-201ENSMUST00000228205 639 ntBASIC8.9□□□□□ -0.98
Atg4aQ8C9S8 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Atg4aQ8C9S8 Gm24924-201ENSMUST00000084007 164 ntBASIC8.9□□□□□ -0.98
Atg4aQ8C9S8 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Atg4aQ8C9S8 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Atg4aQ8C9S8 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC8.9□□□□□ -0.98
Atg4aQ8C9S8 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.98
Atg4aQ8C9S8 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC8.9□□□□□ -0.98
Atg4aQ8C9S8 Gm37163-201ENSMUST00000195439 1690 ntBASIC8.9□□□□□ -0.98
Atg4aQ8C9S8 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Atg4aQ8C9S8 Asxl2-202ENSMUST00000111215 8887 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
Atg4aQ8C9S8 Gm12919-201ENSMUST00000119855 1594 ntBASIC8.9□□□□□ -0.99
Atg4aQ8C9S8 Gm29670-201ENSMUST00000190228 2491 ntBASIC8.9□□□□□ -0.99
Atg4aQ8C9S8 Gm45512-201ENSMUST00000210432 1553 ntBASIC8.9□□□□□ -0.99
Atg4aQ8C9S8 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Gm28651-202ENSMUST00000227968 2693 ntBASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Gm10601-201ENSMUST00000120436 1422 ntBASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Olfr731-204ENSMUST00000214388 5438 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Gm11853-201ENSMUST00000119687 1384 ntBASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Gm11865-201ENSMUST00000118093 859 ntBASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Gm8662-201ENSMUST00000118644 574 ntBASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Gm12331-201ENSMUST00000119927 622 ntBASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Gm16027-201ENSMUST00000161618 758 ntBASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Gm28894-201ENSMUST00000185214 615 ntBASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Gm37369-201ENSMUST00000194179 615 ntBASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Gm43235-201ENSMUST00000200121 297 ntBASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Gm44566-201ENSMUST00000207638 304 ntBASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Gm45888-201ENSMUST00000212348 1229 ntBASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Gm44898-201ENSMUST00000205934 2223 ntBASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Mycbp2-201ENSMUST00000159855 15233 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Atg4aQ8C9S8 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 Gm15203-201ENSMUST00000117668 455 ntBASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 Gm25277-201ENSMUST00000157266 324 ntBASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 Gm23139-201ENSMUST00000179454 132 ntBASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 Gm28952-201ENSMUST00000189285 681 ntBASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 Gm37322-201ENSMUST00000193409 337 ntBASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 Gm20690-202ENSMUST00000195126 355 ntBASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Atg4aQ8C9S8 Gm7394-201ENSMUST00000209138 1032 ntBASIC8.88□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms