Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm45537-201ENSMUST00000211539 2708 ntBASIC8.6□□□□□ -1.03
Alx1Q8C8B0 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Unc79-208ENSMUST00000179002 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Gm45354-201ENSMUST00000199820 2557 ntBASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
Alx1Q8C8B0 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Sorbs2-201ENSMUST00000067065 6337 ntTSL 5 BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Pcdh15-226ENSMUST00000151116 6287 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 n-R5s72-201ENSMUST00000104518 119 ntBASIC8.59□□□□□ -1.03
Alx1Q8C8B0 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Gm17170-201ENSMUST00000112785 316 ntBASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Gm15586-201ENSMUST00000121218 528 ntBASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Gm12321-201ENSMUST00000121485 804 ntBASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Gm16580-201ENSMUST00000162696 1044 ntBASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Gm9381-201ENSMUST00000182285 1012 ntBASIC8.59□□□□□ -1.03
Alx1Q8C8B0 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Gm45100-201ENSMUST00000209153 391 ntBASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Gm38430-201ENSMUST00000209888 1240 ntBASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Gm19056-201ENSMUST00000218220 797 ntBASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Gm19217-201ENSMUST00000218238 328 ntBASIC8.59□□□□□ -1.03
Alx1Q8C8B0 CT009556.4-201ENSMUST00000227092 200 ntBASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Gm12187-201ENSMUST00000119584 1375 ntBASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Alx1Q8C8B0 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Gm6866-201ENSMUST00000188559 2549 ntBASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Alx1Q8C8B0 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Gm37483-201ENSMUST00000194382 1484 ntBASIC8.58□□□□□ -1.04
Alx1Q8C8B0 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Zkscan2-201ENSMUST00000042470 7831 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Alx1Q8C8B0 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Gm37410-201ENSMUST00000193623 3039 ntBASIC8.58□□□□□ -1.04
Alx1Q8C8B0 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Gm25546-201ENSMUST00000103977 132 ntBASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Serpina3h-202ENSMUST00000116393 1226 ntBASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Gm15576-201ENSMUST00000117806 583 ntBASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Gm11263-201ENSMUST00000121853 749 ntBASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Gm14990-201ENSMUST00000122354 445 ntBASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Gm26480-201ENSMUST00000122619 297 ntBASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Gm2709-201ENSMUST00000142979 350 ntBASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Pea15b-201ENSMUST00000182806 387 ntBASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Mir7084-201ENSMUST00000183876 70 ntBASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Gm5261-201ENSMUST00000185860 713 ntBASIC8.58□□□□□ -1.04
Alx1Q8C8B0 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Gm29354-201ENSMUST00000187613 696 ntBASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Gm6472-202ENSMUST00000187973 582 ntBASIC8.58□□□□□ -1.04
Alx1Q8C8B0 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Alx1Q8C8B0 AC156574.1-201ENSMUST00000227084 452 ntBASIC8.58□□□□□ -1.04
Alx1Q8C8B0 CT025630.2-201ENSMUST00000228293 487 ntBASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Alx1Q8C8B0 4930542C16Rik-201ENSMUST00000062438 1090 ntTSL 2 BASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Alx1Q8C8B0 Gm42648-201ENSMUST00000200774 2505 ntBASIC8.58□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms