Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm43681-201ENSMUST00000201581 1903 ntBASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 AC166574.5-201ENSMUST00000227438 1432 ntBASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Gm12710-201ENSMUST00000119011 216 ntBASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Gm2735-201ENSMUST00000136133 277 ntBASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Gm10086-201ENSMUST00000136334 354 ntBASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 AC139569.1-201ENSMUST00000226080 614 ntBASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 AC123705.1-201ENSMUST00000222512 2058 ntBASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim9Q8C7M3 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Gm26945-201ENSMUST00000183191 2011 ntBASIC8.12□□□□□ -1.11
Trim9Q8C7M3 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Gm40778-201ENSMUST00000217825 1344 ntBASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Gm9877-201ENSMUST00000064271 2627 ntBASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 AC154522.1-201ENSMUST00000224647 1903 ntBASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Gm23701-201ENSMUST00000103893 110 ntBASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Gm22152-201ENSMUST00000116966 125 ntBASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Defa-ps7-201ENSMUST00000117139 168 ntBASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Gm13545-201ENSMUST00000119044 482 ntBASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Gm11320-201ENSMUST00000119434 463 ntBASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Gm11850-201ENSMUST00000119679 479 ntBASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Gm15644-201ENSMUST00000121764 387 ntBASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Mir3072-201ENSMUST00000175610 83 ntBASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Gm27218-201ENSMUST00000183745 392 ntBASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Gm38337-201ENSMUST00000193986 599 ntBASIC8.12□□□□□ -1.11
Trim9Q8C7M3 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Gm45478-201ENSMUST00000209472 211 ntBASIC8.12□□□□□ -1.11
Trim9Q8C7M3 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 AC124778.1-201ENSMUST00000216013 162 ntBASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Gm12919-201ENSMUST00000119855 1594 ntBASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Trim9Q8C7M3 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms