Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Gm23082-201ENSMUST00000157852 133 ntBASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Fxyd5-207ENSMUST00000161684 1172 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Gm17235-201ENSMUST00000169128 964 ntBASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Gm18396-201ENSMUST00000177095 361 ntBASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Gm28193-201ENSMUST00000189863 615 ntBASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Gm18150-201ENSMUST00000195341 645 ntBASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Trav12-4-201ENSMUST00000200663 271 ntBASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Gm43090-201ENSMUST00000202459 314 ntBASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Gm34574-202ENSMUST00000219433 1108 ntTSL 5 BASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 AC153152.2-201ENSMUST00000223165 959 ntBASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 AC126805.1-201ENSMUST00000225142 262 ntBASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 AC162183.1-202ENSMUST00000225434 904 ntBASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 AC125350.5-201ENSMUST00000226102 517 ntBASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 AC131997.2-201ENSMUST00000227452 362 ntBASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Olfr1143-201ENSMUST00000090708 945 ntBASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Defa29-201ENSMUST00000098890 508 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Gm43258-201ENSMUST00000200312 1950 ntBASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Gm5681-201ENSMUST00000189217 1533 ntBASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Pex5l-208ENSMUST00000192093 3421 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Akap8-201ENSMUST00000002699 3695 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Zfp820-201ENSMUST00000084141 3695 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Synj1-210ENSMUST00000170853 7012 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 AC164297.4-201ENSMUST00000224225 1307 ntBASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Gm15533-202ENSMUST00000206216 3262 ntBASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Vwa3b-203ENSMUST00000117172 1636 ntAPPRIS P5 TSL 2 BASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Lrtm1-202ENSMUST00000224708 1646 ntAPPRIS ALT2 BASIC7.96□□□□□ -1.14
Pcdh19Q80TF3 Prom1-202ENSMUST00000074113 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Gm43219-201ENSMUST00000197972 1937 ntBASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Unc5c-201ENSMUST00000075282 3890 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Olfr975-202ENSMUST00000216647 2848 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Gm43790-201ENSMUST00000202694 2013 ntBASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Smok2b-202ENSMUST00000162940 2306 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Extl2-202ENSMUST00000106501 2887 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Tnfrsf10b-201ENSMUST00000022663 3179 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 1700015F17Rik-201ENSMUST00000115447 710 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Gm14099-201ENSMUST00000117769 605 ntBASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Gm14528-201ENSMUST00000120615 231 ntBASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Gm13358-201ENSMUST00000121427 569 ntBASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 BC002163-201ENSMUST00000121906 319 ntBASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Gm14328-201ENSMUST00000122178 408 ntBASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Gm20500-201ENSMUST00000174621 321 ntTSL 3 BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Gm26197-201ENSMUST00000175033 115 ntBASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Gm22690-201ENSMUST00000175054 110 ntBASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Gm4850-201ENSMUST00000185684 559 ntBASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Gm5575-201ENSMUST00000190879 398 ntBASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Gm37908-201ENSMUST00000195828 470 ntBASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Abracl-201ENSMUST00000020002 846 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Gm44909-201ENSMUST00000208756 165 ntBASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Gm20946-201ENSMUST00000212367 461 ntBASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Gm18378-201ENSMUST00000216245 628 ntBASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 AC111046.1-201ENSMUST00000217715 412 ntBASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Gm34304-201ENSMUST00000218927 1139 ntTSL 5 BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 AC124715.2-201ENSMUST00000226762 617 ntBASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 AC099612.2-201ENSMUST00000226824 721 ntBASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 AC131586.4-201ENSMUST00000228424 668 ntBASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 AC113031.6-202ENSMUST00000228468 1145 ntBASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 AC136376.1-201ENSMUST00000228496 950 ntBASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Parp9-201ENSMUST00000023622 2973 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Olfr139-201ENSMUST00000050678 948 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Olfr402-201ENSMUST00000073675 1012 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Pcdh19Q80TF3 Gm7493-201ENSMUST00000085919 626 ntBASIC7.95□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 136 ms