Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 AC166574.1-201ENSMUST00000226916 1309 ntBASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Ccdc88cQ6VGS5 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC8.15□□□□□ -1.1
Ccdc88cQ6VGS5 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc88cQ6VGS5 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc88cQ6VGS5 Gm15538-201ENSMUST00000121410 313 ntBASIC8.15□□□□□ -1.1
Ccdc88cQ6VGS5 Gm22024-201ENSMUST00000122733 287 ntBASIC8.15□□□□□ -1.1
Ccdc88cQ6VGS5 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC8.15□□□□□ -1.1
Ccdc88cQ6VGS5 Gm8046-201ENSMUST00000172151 616 ntBASIC8.15□□□□□ -1.1
Ccdc88cQ6VGS5 Gm18848-201ENSMUST00000182069 792 ntBASIC8.15□□□□□ -1.1
Ccdc88cQ6VGS5 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC8.15□□□□□ -1.1
Ccdc88cQ6VGS5 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc88cQ6VGS5 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC8.15□□□□□ -1.1
Ccdc88cQ6VGS5 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc88cQ6VGS5 AC152922.1-201ENSMUST00000216518 1232 ntBASIC8.15□□□□□ -1.1
Ccdc88cQ6VGS5 AC124489.1-201ENSMUST00000225852 526 ntBASIC8.15□□□□□ -1.1
Ccdc88cQ6VGS5 CT025630.2-201ENSMUST00000228293 487 ntBASIC8.15□□□□□ -1.1
Ccdc88cQ6VGS5 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Ccdc88cQ6VGS5 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc88cQ6VGS5 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc88cQ6VGS5 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Ccdc88cQ6VGS5 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc88cQ6VGS5 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Ccdc88cQ6VGS5 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc88cQ6VGS5 Gm44769-201ENSMUST00000206120 2809 ntBASIC8.15□□□□□ -1.1
Ccdc88cQ6VGS5 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 Gm24869-201ENSMUST00000104072 128 ntBASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 Gm13352-201ENSMUST00000117515 262 ntBASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 Gm13196-201ENSMUST00000118297 379 ntBASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 Gm13130-201ENSMUST00000119195 1166 ntBASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 Gm12903-201ENSMUST00000121015 544 ntBASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 Gm15586-201ENSMUST00000121218 528 ntBASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 Gm10913-201ENSMUST00000133732 463 ntBASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 Gm2976-201ENSMUST00000160362 513 ntBASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 CT025639.2-201ENSMUST00000224440 1220 ntBASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 AC135292.2-201ENSMUST00000227559 367 ntBASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 Gm43422-201ENSMUST00000199780 3571 ntBASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 Ctnnd1-210ENSMUST00000111684 6021 ntTSL 5 BASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 Olfr443-ps1-202ENSMUST00000204422 1617 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Ccdc88cQ6VGS5 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Aloxe3-201ENSMUST00000021268 3019 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 CT571245.1-201ENSMUST00000218642 3465 ntBASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 C78859-201ENSMUST00000212800 5943 ntBASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Gm45657-201ENSMUST00000211318 1349 ntBASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Stox2-202ENSMUST00000110367 3424 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Gm14279-201ENSMUST00000117142 332 ntBASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Gm10243-201ENSMUST00000117571 333 ntBASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Gm5611-201ENSMUST00000164523 852 ntBASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Gm8305-201ENSMUST00000180022 1195 ntBASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Gm43905-201ENSMUST00000204516 204 ntBASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Gm18469-201ENSMUST00000208850 439 ntBASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 AC132590.1-201ENSMUST00000224374 1164 ntBASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 AC156574.1-201ENSMUST00000227084 452 ntBASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Gm2840-201ENSMUST00000048361 411 ntBASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Gm10247-201ENSMUST00000090395 333 ntBASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Gm29761-201ENSMUST00000215964 1939 ntBASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Gm18701-201ENSMUST00000188281 1536 ntBASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc88cQ6VGS5 Pde6h-202ENSMUST00000137768 5940 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms