Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC8.83□□□□□ -1
Vps54Q5SPW0 Gm28416-201ENSMUST00000188334 292 ntBASIC8.83□□□□□ -1
Vps54Q5SPW0 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC8.83□□□□□ -1
Vps54Q5SPW0 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC8.83□□□□□ -1
Vps54Q5SPW0 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC8.83□□□□□ -1
Vps54Q5SPW0 Gm44590-201ENSMUST00000206161 391 ntBASIC8.83□□□□□ -1
Vps54Q5SPW0 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC8.83□□□□□ -1
Vps54Q5SPW0 Gm45432-201ENSMUST00000210391 416 ntBASIC8.83□□□□□ -1
Vps54Q5SPW0 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC8.83□□□□□ -1
Vps54Q5SPW0 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC8.83□□□□□ -1
Vps54Q5SPW0 n-R5s60-201ENSMUST00000083299 119 ntBASIC8.83□□□□□ -1
Vps54Q5SPW0 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Vps54Q5SPW0 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC8.83□□□□□ -1
Vps54Q5SPW0 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Vps54Q5SPW0 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Vps54Q5SPW0 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC8.83□□□□□ -1
Vps54Q5SPW0 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Vps54Q5SPW0 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Vps54Q5SPW0 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC8.82□□□□□ -1
Vps54Q5SPW0 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC8.82□□□□□ -1
Vps54Q5SPW0 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Vps54Q5SPW0 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC8.82□□□□□ -1
Vps54Q5SPW0 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Vps54Q5SPW0 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC8.82□□□□□ -1
Vps54Q5SPW0 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC8.82□□□□□ -1
Vps54Q5SPW0 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC8.82□□□□□ -1
Vps54Q5SPW0 Gm16044-201ENSMUST00000118475 450 ntBASIC8.82□□□□□ -1
Vps54Q5SPW0 Gm13744-201ENSMUST00000118953 850 ntBASIC8.82□□□□□ -1
Vps54Q5SPW0 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC8.82□□□□□ -1
Vps54Q5SPW0 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC8.82□□□□□ -1
Vps54Q5SPW0 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Vps54Q5SPW0 Mir1981-201ENSMUST00000157934 82 ntBASIC8.82□□□□□ -1
Vps54Q5SPW0 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC8.82□□□□□ -1
Vps54Q5SPW0 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC8.82□□□□□ -1
Vps54Q5SPW0 Gm36991-201ENSMUST00000191800 648 ntBASIC8.82□□□□□ -1
Vps54Q5SPW0 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC8.82□□□□□ -1
Vps54Q5SPW0 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC8.82□□□□□ -1
Vps54Q5SPW0 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC8.82□□□□□ -1
Vps54Q5SPW0 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC8.82□□□□□ -1
Vps54Q5SPW0 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC8.82□□□□□ -1
Vps54Q5SPW0 4930553I21Rik-201ENSMUST00000214016 580 ntBASIC8.82□□□□□ -1
Vps54Q5SPW0 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Vps54Q5SPW0 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC8.82□□□□□ -1
Vps54Q5SPW0 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC8.82□□□□□ -1
Vps54Q5SPW0 AC134869.2-201ENSMUST00000225788 421 ntBASIC8.82□□□□□ -1
Vps54Q5SPW0 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC8.82□□□□□ -1
Vps54Q5SPW0 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC8.82□□□□□ -1
Vps54Q5SPW0 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Vps54Q5SPW0 Gm45737-201ENSMUST00000208344 1612 ntBASIC8.82□□□□□ -1
Vps54Q5SPW0 CT025619.3-201ENSMUST00000216299 3267 ntBASIC8.82□□□□□ -1
Vps54Q5SPW0 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Vps54Q5SPW0 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Vps54Q5SPW0 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
Vps54Q5SPW0 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Vps54Q5SPW0 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Vps54Q5SPW0 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Vps54Q5SPW0 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC8.82□□□□□ -1
Vps54Q5SPW0 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Vps54Q5SPW0 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Vps54Q5SPW0 Gm10259-201ENSMUST00000091289 1590 ntBASIC8.82□□□□□ -1
Vps54Q5SPW0 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC8.82□□□□□ -1
Vps54Q5SPW0 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Vps54Q5SPW0 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Vps54Q5SPW0 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Vps54Q5SPW0 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Vps54Q5SPW0 AC154828.1-201ENSMUST00000220696 2810 ntBASIC8.81□□□□□ -1
Vps54Q5SPW0 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC8.81□□□□□ -1
Vps54Q5SPW0 Sox6-206ENSMUST00000205405 2903 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Vps54Q5SPW0 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Vps54Q5SPW0 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC8.81□□□□□ -1
Vps54Q5SPW0 Gm9585-201ENSMUST00000219681 1404 ntBASIC8.81□□□□□ -1
Vps54Q5SPW0 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC8.81□□□□□ -1
Vps54Q5SPW0 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Vps54Q5SPW0 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC8.81□□□□□ -1
Vps54Q5SPW0 Olfr443-ps1-202ENSMUST00000204422 1617 ntTSL 1 (best) BASIC8.81□□□□□ -1
Vps54Q5SPW0 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC8.81□□□□□ -1
Vps54Q5SPW0 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Vps54Q5SPW0 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC8.81□□□□□ -1
Vps54Q5SPW0 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC8.81□□□□□ -1
Vps54Q5SPW0 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Vps54Q5SPW0 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Vps54Q5SPW0 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Vps54Q5SPW0 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Vps54Q5SPW0 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC8.81□□□□□ -1
Vps54Q5SPW0 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Vps54Q5SPW0 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
Vps54Q5SPW0 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Vps54Q5SPW0 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC8.81□□□□□ -1
Vps54Q5SPW0 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC8.81□□□□□ -1
Vps54Q5SPW0 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC8.81□□□□□ -1
Vps54Q5SPW0 Gm38337-201ENSMUST00000193986 599 ntBASIC8.81□□□□□ -1
Vps54Q5SPW0 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC8.81□□□□□ -1
Vps54Q5SPW0 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC8.81□□□□□ -1
Vps54Q5SPW0 Gm5305-201ENSMUST00000204010 746 ntBASIC8.81□□□□□ -1
Vps54Q5SPW0 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC8.81□□□□□ -1
Vps54Q5SPW0 Gm19092-201ENSMUST00000209036 969 ntBASIC8.81□□□□□ -1
Vps54Q5SPW0 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Vps54Q5SPW0 AC133948.2-201ENSMUST00000217850 378 ntBASIC8.81□□□□□ -1
Vps54Q5SPW0 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Vps54Q5SPW0 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC8.81□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms