Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 AC107453.1-201ENSMUST00000227490 3268 ntBASIC8.29□□□□□ -1.08
Cntn3Q07409 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Cntn3Q07409 AC159301.1-202ENSMUST00000225860 2133 ntBASIC8.29□□□□□ -1.08
Cntn3Q07409 Ugt3a2-201ENSMUST00000072403 2329 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cntn3Q07409 Gm13081-201ENSMUST00000121527 5599 ntBASIC8.29□□□□□ -1.08
Cntn3Q07409 Gm42611-201ENSMUST00000199446 3407 ntBASIC8.29□□□□□ -1.08
Cntn3Q07409 Rps20-203ENSMUST00000138502 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cntn3Q07409 Mir683-2-201ENSMUST00000102099 109 ntBASIC8.29□□□□□ -1.08
Cntn3Q07409 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC8.29□□□□□ -1.08
Cntn3Q07409 Gm11969-201ENSMUST00000118848 356 ntBASIC8.29□□□□□ -1.08
Cntn3Q07409 Gm11278-201ENSMUST00000121002 997 ntBASIC8.29□□□□□ -1.08
Cntn3Q07409 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC8.29□□□□□ -1.08
Cntn3Q07409 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC8.29□□□□□ -1.08
Cntn3Q07409 Gm17129-201ENSMUST00000168168 505 ntBASIC8.29□□□□□ -1.08
Cntn3Q07409 Gm2951-201ENSMUST00000169447 490 ntBASIC8.29□□□□□ -1.08
Cntn3Q07409 Gm24576-201ENSMUST00000175508 248 ntBASIC8.29□□□□□ -1.08
Cntn3Q07409 Mir683-1-201ENSMUST00000179371 109 ntBASIC8.29□□□□□ -1.08
Cntn3Q07409 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC8.29□□□□□ -1.08
Cntn3Q07409 Gm27435-201ENSMUST00000183588 88 ntBASIC8.29□□□□□ -1.08
Cntn3Q07409 Gm27866-201ENSMUST00000184459 171 ntBASIC8.29□□□□□ -1.08
Cntn3Q07409 Gm8304-201ENSMUST00000185744 584 ntBASIC8.29□□□□□ -1.08
Cntn3Q07409 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC8.29□□□□□ -1.08
Cntn3Q07409 Gm18033-201ENSMUST00000186678 550 ntBASIC8.29□□□□□ -1.08
Cntn3Q07409 Gm43568-202ENSMUST00000198427 476 ntTSL 3 BASIC8.29□□□□□ -1.08
Cntn3Q07409 Gm9038-201ENSMUST00000203400 604 ntBASIC8.29□□□□□ -1.08
Cntn3Q07409 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC8.29□□□□□ -1.08
Cntn3Q07409 Gm4977-201ENSMUST00000215709 1262 ntBASIC8.29□□□□□ -1.08
Cntn3Q07409 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC8.29□□□□□ -1.08
Cntn3Q07409 AC165349.2-201ENSMUST00000219097 426 ntBASIC8.29□□□□□ -1.08
Cntn3Q07409 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC8.29□□□□□ -1.08
Cntn3Q07409 AC159242.1-201ENSMUST00000225832 194 ntBASIC8.29□□□□□ -1.08
Cntn3Q07409 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC8.29□□□□□ -1.08
Cntn3Q07409 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cntn3Q07409 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cntn3Q07409 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC8.29□□□□□ -1.08
Cntn3Q07409 Gm6054-201ENSMUST00000078052 378 ntBASIC8.29□□□□□ -1.08
Cntn3Q07409 n-R5s156-201ENSMUST00000083377 105 ntBASIC8.29□□□□□ -1.08
Cntn3Q07409 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Cntn3Q07409 Ezh1-202ENSMUST00000107284 4207 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cntn3Q07409 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
Cntn3Q07409 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cntn3Q07409 Gm45786-201ENSMUST00000213021 2278 ntBASIC8.29□□□□□ -1.08
Cntn3Q07409 Nxpe4-202ENSMUST00000215780 2875 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cntn3Q07409 Olfr523-204ENSMUST00000214272 3780 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Cntn3Q07409 Pik3cg-205ENSMUST00000217915 3340 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Cntn3Q07409 Nol4-202ENSMUST00000081423 3309 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Cntn3Q07409 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Cntn3Q07409 Cnot2-204ENSMUST00000164088 2618 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Cntn3Q07409 AC154461.6-201ENSMUST00000224815 2630 ntBASIC8.29□□□□□ -1.08
Cntn3Q07409 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cntn3Q07409 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Cntn3Q07409 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cntn3Q07409 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Cntn3Q07409 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
Cntn3Q07409 Proz-201ENSMUST00000033822 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Cntn3Q07409 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Cntn3Q07409 Asb17-201ENSMUST00000044089 2553 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Cntn3Q07409 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Cntn3Q07409 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm43258-201ENSMUST00000200312 1950 ntBASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm42679-201ENSMUST00000197086 2906 ntBASIC8.28□□□□□ -1.08
Cntn3Q07409 Pdzd2-201ENSMUST00000075317 10756 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm43331-201ENSMUST00000197991 1689 ntBASIC8.28□□□□□ -1.08
Cntn3Q07409 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm25167-201ENSMUST00000104188 120 ntBASIC8.28□□□□□ -1.08
Cntn3Q07409 Snord65-201ENSMUST00000104269 72 ntBASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm7091-201ENSMUST00000116438 586 ntBASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm15040-201ENSMUST00000118561 1241 ntBASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm11907-201ENSMUST00000118918 1007 ntBASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm4910-201ENSMUST00000119605 366 ntBASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm13649-201ENSMUST00000122325 606 ntBASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Cntn3Q07409 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm23222-201ENSMUST00000158117 76 ntBASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm26355-201ENSMUST00000158220 105 ntBASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm25432-201ENSMUST00000158284 66 ntBASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm7162-201ENSMUST00000161205 1024 ntBASIC8.28□□□□□ -1.08
Cntn3Q07409 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC8.28□□□□□ -1.08
Cntn3Q07409 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Cntn3Q07409 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm20485-201ENSMUST00000174452 394 ntTSL 2 BASIC8.28□□□□□ -1.08
Cntn3Q07409 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm18709-201ENSMUST00000180564 489 ntBASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC8.28□□□□□ -1.08
Cntn3Q07409 V1rg10-201ENSMUST00000183378 937 ntBASIC8.28□□□□□ -1.08
Cntn3Q07409 Txn-ps1-201ENSMUST00000186385 309 ntBASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm29145-201ENSMUST00000189914 456 ntBASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm29072-201ENSMUST00000191149 678 ntBASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm22149-202ENSMUST00000196259 137 ntBASIC8.28□□□□□ -1.08
Cntn3Q07409 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm42926-201ENSMUST00000200496 697 ntBASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm17909-201ENSMUST00000207587 907 ntBASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC8.28□□□□□ -1.08
Cntn3Q07409 Gm20946-201ENSMUST00000212367 461 ntBASIC8.28□□□□□ -1.08
Cntn3Q07409 AC159819.1-201ENSMUST00000213911 328 ntBASIC8.28□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms