Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Mir1968-201ENSMUST00000157429 68 ntBASIC6.56□□□□□ -1.36
Sec61a1P61620 Scarna17-201ENSMUST00000158064 79 ntBASIC6.56□□□□□ -1.36
Sec61a1P61620 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC6.56□□□□□ -1.36
Sec61a1P61620 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC6.56□□□□□ -1.36
Sec61a1P61620 Gm20452-201ENSMUST00000174686 513 ntBASIC6.56□□□□□ -1.36
Sec61a1P61620 Gm26269-201ENSMUST00000180144 126 ntBASIC6.56□□□□□ -1.36
Sec61a1P61620 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a1P61620 Gm29362-201ENSMUST00000187898 133 ntBASIC6.56□□□□□ -1.36
Sec61a1P61620 Gm5251-201ENSMUST00000188959 472 ntBASIC6.56□□□□□ -1.36
Sec61a1P61620 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC6.56□□□□□ -1.36
Sec61a1P61620 Gm5575-201ENSMUST00000190879 398 ntBASIC6.56□□□□□ -1.36
Sec61a1P61620 Trbv9-201ENSMUST00000194494 290 ntBASIC6.56□□□□□ -1.36
Sec61a1P61620 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Sec61a1P61620 Gm42464-201ENSMUST00000196717 417 ntBASIC6.56□□□□□ -1.36
Sec61a1P61620 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC6.56□□□□□ -1.36
Sec61a1P61620 Gm42965-201ENSMUST00000201254 250 ntBASIC6.56□□□□□ -1.36
Sec61a1P61620 Gm43008-201ENSMUST00000202346 286 ntBASIC6.56□□□□□ -1.36
Sec61a1P61620 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Sec61a1P61620 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC6.56□□□□□ -1.36
Sec61a1P61620 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC6.56□□□□□ -1.36
Sec61a1P61620 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC6.56□□□□□ -1.36
Sec61a1P61620 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC6.56□□□□□ -1.36
Sec61a1P61620 AC158531.2-201ENSMUST00000224264 473 ntBASIC6.56□□□□□ -1.36
Sec61a1P61620 AC124196.1-201ENSMUST00000225970 1032 ntBASIC6.56□□□□□ -1.36
Sec61a1P61620 AC124715.2-201ENSMUST00000226762 617 ntBASIC6.56□□□□□ -1.36
Sec61a1P61620 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a1P61620 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Sec61a1P61620 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
Sec61a1P61620 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a1P61620 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a1P61620 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a1P61620 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a1P61620 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Sec61a1P61620 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a1P61620 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC6.56□□□□□ -1.36
Sec61a1P61620 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a1P61620 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a1P61620 Gm43961-201ENSMUST00000203289 1872 ntBASIC6.56□□□□□ -1.36
Sec61a1P61620 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a1P61620 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a1P61620 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a1P61620 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC6.55□□□□□ -1.36
Sec61a1P61620 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a1P61620 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a1P61620 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Sec61a1P61620 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a1P61620 AC165260.6-202ENSMUST00000224959 1958 ntBASIC6.55□□□□□ -1.36
Sec61a1P61620 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a1P61620 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Sec61a1P61620 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a1P61620 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Sec61a1P61620 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Sec61a1P61620 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Sec61a1P61620 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a1P61620 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a1P61620 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a1P61620 Gm15681-201ENSMUST00000137501 2704 ntBASIC6.55□□□□□ -1.36
Sec61a1P61620 Gm24071-201ENSMUST00000104520 132 ntBASIC6.55□□□□□ -1.36
Sec61a1P61620 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a1P61620 Gm16418-201ENSMUST00000118577 171 ntBASIC6.55□□□□□ -1.36
Sec61a1P61620 Gm13915-201ENSMUST00000119314 931 ntBASIC6.55□□□□□ -1.36
Sec61a1P61620 Gm12692-201ENSMUST00000121092 546 ntBASIC6.55□□□□□ -1.36
Sec61a1P61620 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a1P61620 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC6.55□□□□□ -1.36
Sec61a1P61620 Mir1962-201ENSMUST00000157516 121 ntBASIC6.55□□□□□ -1.36
Sec61a1P61620 Gm6465-201ENSMUST00000168154 1098 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Sec61a1P61620 Gm19840-201ENSMUST00000169624 882 ntBASIC6.55□□□□□ -1.36
Sec61a1P61620 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC6.55□□□□□ -1.36
Sec61a1P61620 Gm18033-201ENSMUST00000186678 550 ntBASIC6.55□□□□□ -1.36
Sec61a1P61620 Gm8307-201ENSMUST00000187682 1150 ntBASIC6.55□□□□□ -1.36
Sec61a1P61620 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC6.55□□□□□ -1.36
Sec61a1P61620 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Sec61a1P61620 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a1P61620 Gm43037-201ENSMUST00000196808 250 ntBASIC6.55□□□□□ -1.36
Sec61a1P61620 Mir1897-202ENSMUST00000198006 79 ntBASIC6.55□□□□□ -1.36
Sec61a1P61620 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC6.55□□□□□ -1.36
Sec61a1P61620 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Sec61a1P61620 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC6.55□□□□□ -1.36
Sec61a1P61620 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC6.55□□□□□ -1.36
Sec61a1P61620 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Sec61a1P61620 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC6.55□□□□□ -1.36
Sec61a1P61620 CT030170.6-202ENSMUST00000223186 544 ntBASIC6.55□□□□□ -1.36
Sec61a1P61620 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Sec61a1P61620 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a1P61620 Gm43395-201ENSMUST00000198717 2240 ntBASIC6.55□□□□□ -1.36
Sec61a1P61620 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
Sec61a1P61620 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a1P61620 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a1P61620 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
Sec61a1P61620 Gm43750-201ENSMUST00000199027 2493 ntBASIC6.55□□□□□ -1.36
Sec61a1P61620 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC6.55□□□□□ -1.36
Sec61a1P61620 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a1P61620 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC6.55□□□□□ -1.36
Sec61a1P61620 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
Sec61a1P61620 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61a1P61620 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sec61a1P61620 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC6.54□□□□□ -1.36
Sec61a1P61620 Gm43022-201ENSMUST00000197067 4268 ntBASIC6.54□□□□□ -1.36
Sec61a1P61620 Gm8836-201ENSMUST00000198196 1348 ntBASIC6.54□□□□□ -1.36
Sec61a1P61620 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms