Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC7.94□□□□□ -1.14
Shmt1P50431 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC7.94□□□□□ -1.14
Shmt1P50431 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Shmt1P50431 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Shmt1P50431 Gm26784-201ENSMUST00000181666 410 ntBASIC7.94□□□□□ -1.14
Shmt1P50431 Gm21430-201ENSMUST00000182998 998 ntBASIC7.94□□□□□ -1.14
Shmt1P50431 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC7.94□□□□□ -1.14
Shmt1P50431 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC7.94□□□□□ -1.14
Shmt1P50431 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC7.94□□□□□ -1.14
Shmt1P50431 Gm7369-201ENSMUST00000192738 936 ntBASIC7.94□□□□□ -1.14
Shmt1P50431 Gm2505-201ENSMUST00000200413 825 ntBASIC7.94□□□□□ -1.14
Shmt1P50431 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC7.94□□□□□ -1.14
Shmt1P50431 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC7.94□□□□□ -1.14
Shmt1P50431 Gm31663-202ENSMUST00000208481 1190 ntBASIC7.94□□□□□ -1.14
Shmt1P50431 Gm4972-201ENSMUST00000211108 1254 ntBASIC7.94□□□□□ -1.14
Shmt1P50431 Gm45506-201ENSMUST00000211620 280 ntBASIC7.94□□□□□ -1.14
Shmt1P50431 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC7.94□□□□□ -1.14
Shmt1P50431 AC153899.1-201ENSMUST00000214092 1117 ntBASIC7.94□□□□□ -1.14
Shmt1P50431 AC164424.3-201ENSMUST00000220809 148 ntBASIC7.94□□□□□ -1.14
Shmt1P50431 AC116502.1-201ENSMUST00000220989 291 ntBASIC7.94□□□□□ -1.14
Shmt1P50431 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC7.94□□□□□ -1.14
Shmt1P50431 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC7.94□□□□□ -1.14
Shmt1P50431 AC166358.8-201ENSMUST00000223288 105 ntBASIC7.94□□□□□ -1.14
Shmt1P50431 AC124739.1-201ENSMUST00000223433 148 ntBASIC7.94□□□□□ -1.14
Shmt1P50431 AC133598.2-201ENSMUST00000224302 624 ntBASIC7.94□□□□□ -1.14
Shmt1P50431 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Shmt1P50431 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Shmt1P50431 Gm20302-201ENSMUST00000080671 275 ntBASIC7.94□□□□□ -1.14
Shmt1P50431 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Shmt1P50431 Gm6166-201ENSMUST00000098689 409 ntBASIC7.94□□□□□ -1.14
Shmt1P50431 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Shmt1P50431 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC7.94□□□□□ -1.14
Shmt1P50431 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Shmt1P50431 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Shmt1P50431 Gm44441-201ENSMUST00000203642 2475 ntBASIC7.94□□□□□ -1.14
Shmt1P50431 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
Shmt1P50431 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Shmt1P50431 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Shmt1P50431 Tcp10c-201ENSMUST00000097403 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Shmt1P50431 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Shmt1P50431 Gm42479-201ENSMUST00000198654 1356 ntBASIC7.94□□□□□ -1.14
Shmt1P50431 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Shmt1P50431 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Shmt1P50431 AC136019.1-201ENSMUST00000226503 1412 ntBASIC7.94□□□□□ -1.14
Shmt1P50431 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Shmt1P50431 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC7.94□□□□□ -1.14
Shmt1P50431 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC7.93□□□□□ -1.14
Shmt1P50431 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Shmt1P50431 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Shmt1P50431 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Shmt1P50431 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC7.93□□□□□ -1.14
Shmt1P50431 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Shmt1P50431 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC7.93□□□□□ -1.14
Shmt1P50431 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Shmt1P50431 Aloxe3-201ENSMUST00000021268 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Shmt1P50431 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Shmt1P50431 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Shmt1P50431 Gm45477-201ENSMUST00000200213 5498 ntBASIC7.93□□□□□ -1.14
Shmt1P50431 Gm37163-201ENSMUST00000195439 1690 ntBASIC7.93□□□□□ -1.14
Shmt1P50431 Fgfbp1-202ENSMUST00000199481 2191 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Shmt1P50431 Gm38099-201ENSMUST00000193280 3170 ntBASIC7.93□□□□□ -1.14
Shmt1P50431 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Shmt1P50431 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Shmt1P50431 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Shmt1P50431 Gm12346-201ENSMUST00000121455 2255 ntBASIC7.93□□□□□ -1.14
Shmt1P50431 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Shmt1P50431 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC7.93□□□□□ -1.14
Shmt1P50431 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Shmt1P50431 Gm12331-201ENSMUST00000119927 622 ntBASIC7.93□□□□□ -1.14
Shmt1P50431 Gm16057-201ENSMUST00000120811 759 ntBASIC7.93□□□□□ -1.14
Shmt1P50431 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC7.93□□□□□ -1.14
Shmt1P50431 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC7.93□□□□□ -1.14
Shmt1P50431 Gm26587-201ENSMUST00000180795 989 ntBASIC7.93□□□□□ -1.14
Shmt1P50431 Gm29496-201ENSMUST00000189854 693 ntBASIC7.93□□□□□ -1.14
Shmt1P50431 Gm7512-201ENSMUST00000195217 1170 ntBASIC7.93□□□□□ -1.14
Shmt1P50431 Gm37490-201ENSMUST00000195566 724 ntBASIC7.93□□□□□ -1.14
Shmt1P50431 Gm42516-201ENSMUST00000198691 767 ntBASIC7.93□□□□□ -1.14
Shmt1P50431 Gm44237-201ENSMUST00000205183 936 ntBASIC7.93□□□□□ -1.14
Shmt1P50431 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC7.93□□□□□ -1.14
Shmt1P50431 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Shmt1P50431 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Shmt1P50431 Gm7419-201ENSMUST00000209962 925 ntBASIC7.93□□□□□ -1.14
Shmt1P50431 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC7.93□□□□□ -1.14
Shmt1P50431 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Shmt1P50431 AC147245.1-201ENSMUST00000223294 677 ntBASIC7.93□□□□□ -1.14
Shmt1P50431 Gcnt2-204ENSMUST00000223570 335 ntBASIC7.93□□□□□ -1.14
Shmt1P50431 CT010472.1-201ENSMUST00000224000 704 ntBASIC7.93□□□□□ -1.14
Shmt1P50431 CT009713.5-201ENSMUST00000224508 909 ntBASIC7.93□□□□□ -1.14
Shmt1P50431 CT009550.2-201ENSMUST00000228851 399 ntBASIC7.93□□□□□ -1.14
Shmt1P50431 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Shmt1P50431 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Shmt1P50431 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Shmt1P50431 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Shmt1P50431 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC7.93□□□□□ -1.14
Shmt1P50431 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Shmt1P50431 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Shmt1P50431 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Shmt1P50431 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Shmt1P50431 Gm7265-201ENSMUST00000192735 3502 ntBASIC7.93□□□□□ -1.14
Shmt1P50431 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms