Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Rfx1P48377 Gm15189-201ENSMUST00000121164 1966 ntBASIC9.24□□□□□ -0.93
Rfx1P48377 Gm43747-201ENSMUST00000201412 1330 ntBASIC9.24□□□□□ -0.93
Rfx1P48377 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rfx1P48377 Slc25a14-202ENSMUST00000114936 1582 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.93
Rfx1P48377 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rfx1P48377 Gm43769-201ENSMUST00000201871 4323 ntBASIC9.24□□□□□ -0.93
Rfx1P48377 Gm38302-201ENSMUST00000191676 2076 ntBASIC9.24□□□□□ -0.93
Rfx1P48377 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rfx1P48377 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rfx1P48377 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rfx1P48377 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rfx1P48377 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Rfx1P48377 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rfx1P48377 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rfx1P48377 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Rfx1P48377 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rfx1P48377 Gm13301-201ENSMUST00000121728 2446 ntBASIC9.23□□□□□ -0.93
Rfx1P48377 AC124572.1-201ENSMUST00000218155 2406 ntBASIC9.23□□□□□ -0.93
Rfx1P48377 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Rfx1P48377 Ighv1-22-201ENSMUST00000103507 351 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Rfx1P48377 Gps2-203ENSMUST00000116358 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rfx1P48377 Gm11416-201ENSMUST00000119111 863 ntBASIC9.23□□□□□ -0.93
Rfx1P48377 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC9.23□□□□□ -0.93
Rfx1P48377 Gm13921-201ENSMUST00000119411 463 ntBASIC9.23□□□□□ -0.93
Rfx1P48377 Gm13005-201ENSMUST00000119518 585 ntBASIC9.23□□□□□ -0.93
Rfx1P48377 Gm11955-201ENSMUST00000119801 470 ntBASIC9.23□□□□□ -0.93
Rfx1P48377 Gm13586-201ENSMUST00000121784 464 ntBASIC9.23□□□□□ -0.93
Rfx1P48377 Gm14253-201ENSMUST00000122112 639 ntBASIC9.23□□□□□ -0.93
Rfx1P48377 Fam187b-202ENSMUST00000128384 1244 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
Rfx1P48377 Gm15416-201ENSMUST00000131080 442 ntTSL 3 BASIC9.23□□□□□ -0.93
Rfx1P48377 Gm9458-201ENSMUST00000135273 727 ntBASIC9.23□□□□□ -0.93
Rfx1P48377 Gm15343-201ENSMUST00000136382 640 ntTSL 3 BASIC9.23□□□□□ -0.93
Rfx1P48377 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rfx1P48377 Gm26487-201ENSMUST00000158022 94 ntBASIC9.23□□□□□ -0.93
Rfx1P48377 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Rfx1P48377 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC9.23□□□□□ -0.93
Rfx1P48377 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Rfx1P48377 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Rfx1P48377 Gm933-201ENSMUST00000179384 679 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Rfx1P48377 Trav5d-4-201ENSMUST00000179701 343 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Rfx1P48377 Trav5n-4-201ENSMUST00000179997 343 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Rfx1P48377 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC9.23□□□□□ -0.93
Rfx1P48377 Mir7659-201ENSMUST00000184079 58 ntBASIC9.23□□□□□ -0.93
Rfx1P48377 Gm29291-201ENSMUST00000186055 686 ntTSL 3 BASIC9.23□□□□□ -0.93
Rfx1P48377 Scgb2b4-ps-201ENSMUST00000186705 340 ntBASIC9.23□□□□□ -0.93
Rfx1P48377 Gm28917-201ENSMUST00000187294 237 ntBASIC9.23□□□□□ -0.93
Rfx1P48377 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC9.23□□□□□ -0.93
Rfx1P48377 Gm28766-201ENSMUST00000191086 234 ntBASIC9.23□□□□□ -0.93
Rfx1P48377 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC9.23□□□□□ -0.93
Rfx1P48377 Mir703-201ENSMUST00000197105 109 ntBASIC9.23□□□□□ -0.93
Rfx1P48377 Gm43840-201ENSMUST00000199444 484 ntBASIC9.23□□□□□ -0.93
Rfx1P48377 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
Rfx1P48377 Gm42884-201ENSMUST00000200729 422 ntTSL 2 BASIC9.23□□□□□ -0.93
Rfx1P48377 Olfr326-ps1-201ENSMUST00000204790 392 ntBASIC9.23□□□□□ -0.93
Rfx1P48377 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Rfx1P48377 Chmp2a-204ENSMUST00000211344 606 ntTSL 5 BASIC9.23□□□□□ -0.93
Rfx1P48377 Chmp2a-206ENSMUST00000211626 726 ntTSL 2 BASIC9.23□□□□□ -0.93
Rfx1P48377 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC9.23□□□□□ -0.93
Rfx1P48377 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC9.23□□□□□ -0.93
Rfx1P48377 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rfx1P48377 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Rfx1P48377 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Rfx1P48377 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Rfx1P48377 Clec3a-201ENSMUST00000009018 591 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rfx1P48377 Gm38009-201ENSMUST00000194884 3341 ntBASIC9.23□□□□□ -0.93
Rfx1P48377 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rfx1P48377 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rfx1P48377 Gm37474-201ENSMUST00000194812 1814 ntBASIC9.23□□□□□ -0.93
Rfx1P48377 CT025675.1-201ENSMUST00000228171 1567 ntBASIC9.23□□□□□ -0.93
Rfx1P48377 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rfx1P48377 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Rfx1P48377 Gm35392-201ENSMUST00000209934 2121 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Rfx1P48377 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Rfx1P48377 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Rfx1P48377 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Rfx1P48377 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rfx1P48377 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Rfx1P48377 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Rfx1P48377 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rfx1P48377 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Rfx1P48377 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rfx1P48377 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rfx1P48377 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rfx1P48377 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Rfx1P48377 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Rfx1P48377 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rfx1P48377 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC9.22□□□□□ -0.93
Rfx1P48377 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rfx1P48377 Ighv1-72-201ENSMUST00000103541 396 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Rfx1P48377 Trav12-1-201ENSMUST00000103650 344 ntAPPRIS ALT2 BASIC9.22□□□□□ -0.93
Rfx1P48377 n-R5s90-201ENSMUST00000103968 118 ntBASIC9.22□□□□□ -0.93
Rfx1P48377 Gm24340-201ENSMUST00000104208 97 ntBASIC9.22□□□□□ -0.93
Rfx1P48377 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC9.22□□□□□ -0.93
Rfx1P48377 Gm12577-201ENSMUST00000119701 574 ntBASIC9.22□□□□□ -0.93
Rfx1P48377 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC9.22□□□□□ -0.93
Rfx1P48377 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rfx1P48377 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rfx1P48377 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC9.22□□□□□ -0.93
Rfx1P48377 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms