Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Traf1P39428 Gm23007-201ENSMUST00000158951 177 ntBASIC8.71□□□□□ -1.02
Traf1P39428 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC8.71□□□□□ -1.02
Traf1P39428 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC8.71□□□□□ -1.02
Traf1P39428 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Traf1P39428 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC8.71□□□□□ -1.02
Traf1P39428 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC8.71□□□□□ -1.02
Traf1P39428 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC8.71□□□□□ -1.02
Traf1P39428 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC8.71□□□□□ -1.02
Traf1P39428 Gm18226-201ENSMUST00000215261 521 ntBASIC8.71□□□□□ -1.02
Traf1P39428 Gm19056-201ENSMUST00000218220 797 ntBASIC8.71□□□□□ -1.02
Traf1P39428 AC132446.1-201ENSMUST00000222655 226 ntBASIC8.71□□□□□ -1.02
Traf1P39428 AC147245.1-201ENSMUST00000223294 677 ntBASIC8.71□□□□□ -1.02
Traf1P39428 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Traf1P39428 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC8.71□□□□□ -1.02
Traf1P39428 Gm6166-201ENSMUST00000098689 409 ntBASIC8.71□□□□□ -1.02
Traf1P39428 Gm37403-201ENSMUST00000193775 3521 ntBASIC8.71□□□□□ -1.02
Traf1P39428 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Traf1P39428 Gm38288-201ENSMUST00000195330 1320 ntBASIC8.71□□□□□ -1.02
Traf1P39428 AC166574.1-201ENSMUST00000226916 1309 ntBASIC8.71□□□□□ -1.02
Traf1P39428 Gm37163-201ENSMUST00000195439 1690 ntBASIC8.71□□□□□ -1.02
Traf1P39428 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC8.71□□□□□ -1.02
Traf1P39428 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Traf1P39428 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Traf1P39428 Sorbs2-201ENSMUST00000067065 6337 ntTSL 5 BASIC8.71□□□□□ -1.02
Traf1P39428 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Traf1P39428 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Traf1P39428 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Traf1P39428 Gm43534-201ENSMUST00000197685 2853 ntBASIC8.71□□□□□ -1.02
Traf1P39428 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Traf1P39428 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Traf1P39428 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC8.7□□□□□ -1.02
Traf1P39428 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Traf1P39428 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Traf1P39428 Gm28649-201ENSMUST00000189153 1581 ntBASIC8.7□□□□□ -1.02
Traf1P39428 Gm42763-201ENSMUST00000199595 2087 ntBASIC8.7□□□□□ -1.02
Traf1P39428 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Traf1P39428 Gm25276-201ENSMUST00000104300 124 ntBASIC8.7□□□□□ -1.02
Traf1P39428 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Traf1P39428 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Traf1P39428 Serpina3h-202ENSMUST00000116393 1226 ntBASIC8.7□□□□□ -1.02
Traf1P39428 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Traf1P39428 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC8.7□□□□□ -1.02
Traf1P39428 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC8.7□□□□□ -1.02
Traf1P39428 Gm7512-201ENSMUST00000195217 1170 ntBASIC8.7□□□□□ -1.02
Traf1P39428 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC8.7□□□□□ -1.02
Traf1P39428 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC8.7□□□□□ -1.02
Traf1P39428 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Traf1P39428 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC8.7□□□□□ -1.02
Traf1P39428 Gm19092-201ENSMUST00000209036 969 ntBASIC8.7□□□□□ -1.02
Traf1P39428 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC8.7□□□□□ -1.02
Traf1P39428 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Traf1P39428 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC8.7□□□□□ -1.02
Traf1P39428 Gm6667-201ENSMUST00000217169 564 ntBASIC8.7□□□□□ -1.02
Traf1P39428 AC164550.1-201ENSMUST00000217821 1066 ntBASIC8.7□□□□□ -1.02
Traf1P39428 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Traf1P39428 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Traf1P39428 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Traf1P39428 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Traf1P39428 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Traf1P39428 Gm42462-201ENSMUST00000196543 1363 ntBASIC8.7□□□□□ -1.02
Traf1P39428 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Traf1P39428 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Traf1P39428 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Traf1P39428 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Traf1P39428 Gm9256-201ENSMUST00000198106 1420 ntBASIC8.7□□□□□ -1.02
Traf1P39428 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Traf1P39428 Gm6786-201ENSMUST00000203165 1915 ntBASIC8.7□□□□□ -1.02
Traf1P39428 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC8.7□□□□□ -1.02
Traf1P39428 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Traf1P39428 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Traf1P39428 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Traf1P39428 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Traf1P39428 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC8.69□□□□□ -1.02
Traf1P39428 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Traf1P39428 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC8.69□□□□□ -1.02
Traf1P39428 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Traf1P39428 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC8.69□□□□□ -1.02
Traf1P39428 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Traf1P39428 Gm15913-201ENSMUST00000118492 331 ntBASIC8.69□□□□□ -1.02
Traf1P39428 Gm13525-201ENSMUST00000120607 478 ntBASIC8.69□□□□□ -1.02
Traf1P39428 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Traf1P39428 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC8.69□□□□□ -1.02
Traf1P39428 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC8.69□□□□□ -1.02
Traf1P39428 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC8.69□□□□□ -1.02
Traf1P39428 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC8.69□□□□□ -1.02
Traf1P39428 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC8.69□□□□□ -1.02
Traf1P39428 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC8.69□□□□□ -1.02
Traf1P39428 Gm26587-201ENSMUST00000180795 989 ntBASIC8.69□□□□□ -1.02
Traf1P39428 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC8.69□□□□□ -1.02
Traf1P39428 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Traf1P39428 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC8.69□□□□□ -1.02
Traf1P39428 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Traf1P39428 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC8.69□□□□□ -1.02
Traf1P39428 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC8.69□□□□□ -1.02
Traf1P39428 AC139323.1-201ENSMUST00000223370 1040 ntBASIC8.69□□□□□ -1.02
Traf1P39428 AC154747.4-201ENSMUST00000224802 903 ntBASIC8.69□□□□□ -1.02
Traf1P39428 AC125087.1-201ENSMUST00000227552 514 ntBASIC8.69□□□□□ -1.02
Traf1P39428 Prkaa1-202ENSMUST00000228218 4618 ntBASIC8.69□□□□□ -1.02
Traf1P39428 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms