Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC9.7□□□□□ -0.86
Col18a1P39061 Gm25904-201ENSMUST00000158491 143 ntBASIC9.7□□□□□ -0.86
Col18a1P39061 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Col18a1P39061 Gm25026-201ENSMUST00000175017 188 ntBASIC9.7□□□□□ -0.86
Col18a1P39061 Gm7694-201ENSMUST00000179801 3827 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Col18a1P39061 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC9.7□□□□□ -0.86
Col18a1P39061 CT025685.1-201ENSMUST00000213716 150 ntBASIC9.7□□□□□ -0.86
Col18a1P39061 AC154252.1-201ENSMUST00000226041 473 ntBASIC9.7□□□□□ -0.86
Col18a1P39061 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col18a1P39061 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col18a1P39061 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Col18a1P39061 Gm6614-201ENSMUST00000111832 1953 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Col18a1P39061 Mbtps1-202ENSMUST00000098362 4336 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col18a1P39061 AC123738.2-201ENSMUST00000223791 1899 ntBASIC9.7□□□□□ -0.86
Col18a1P39061 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col18a1P39061 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Col18a1P39061 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col18a1P39061 Tnfrsf19-202ENSMUST00000111236 3958 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col18a1P39061 Aldh2-201ENSMUST00000031411 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col18a1P39061 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col18a1P39061 Pex5l-210ENSMUST00000193681 3620 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Col18a1P39061 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col18a1P39061 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col18a1P39061 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col18a1P39061 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
Col18a1P39061 Mrpl48-201ENSMUST00000064334 1865 ntBASIC9.69□□□□□ -0.86
Col18a1P39061 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col18a1P39061 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col18a1P39061 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC9.69□□□□□ -0.86
Col18a1P39061 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Col18a1P39061 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col18a1P39061 Gm14712-201ENSMUST00000120195 772 ntBASIC9.69□□□□□ -0.86
Col18a1P39061 Gm25780-201ENSMUST00000122528 253 ntBASIC9.69□□□□□ -0.86
Col18a1P39061 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Col18a1P39061 Gm25246-201ENSMUST00000175476 69 ntBASIC9.69□□□□□ -0.86
Col18a1P39061 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col18a1P39061 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Col18a1P39061 Gm19080-201ENSMUST00000196082 550 ntBASIC9.69□□□□□ -0.86
Col18a1P39061 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC9.69□□□□□ -0.86
Col18a1P39061 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col18a1P39061 Gm3678-201ENSMUST00000218888 492 ntBASIC9.69□□□□□ -0.86
Col18a1P39061 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Col18a1P39061 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col18a1P39061 Gm16020-201ENSMUST00000084281 210 ntBASIC9.69□□□□□ -0.86
Col18a1P39061 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
Col18a1P39061 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col18a1P39061 CT010505.3-201ENSMUST00000227835 1651 ntBASIC9.69□□□□□ -0.86
Col18a1P39061 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Col18a1P39061 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col18a1P39061 Olfr1350-202ENSMUST00000207221 1521 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
Col18a1P39061 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC9.69□□□□□ -0.86
Col18a1P39061 Wdpcp-201ENSMUST00000020568 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col18a1P39061 Tyrp1-201ENSMUST00000006151 2720 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col18a1P39061 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Col18a1P39061 Gm12183-201ENSMUST00000120566 1848 ntBASIC9.69□□□□□ -0.86
Col18a1P39061 Prcp-202ENSMUST00000207594 2245 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Col18a1P39061 1700006J14Rik-203ENSMUST00000160091 2629 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Col18a1P39061 Rbm25-201ENSMUST00000048155 4226 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Col18a1P39061 Col4a5-201ENSMUST00000112930 6285 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col18a1P39061 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC9.68□□□□□ -0.86
Col18a1P39061 Gm38302-201ENSMUST00000191676 2076 ntBASIC9.68□□□□□ -0.86
Col18a1P39061 Nek6-201ENSMUST00000054234 10338 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col18a1P39061 Uba7-201ENSMUST00000035216 3195 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col18a1P39061 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Col18a1P39061 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Col18a1P39061 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Col18a1P39061 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Col18a1P39061 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col18a1P39061 Mir697-201ENSMUST00000102316 109 ntBASIC9.68□□□□□ -0.86
Col18a1P39061 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col18a1P39061 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Col18a1P39061 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC9.68□□□□□ -0.86
Col18a1P39061 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC9.68□□□□□ -0.86
Col18a1P39061 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC9.68□□□□□ -0.86
Col18a1P39061 CT009556.1-201ENSMUST00000227282 449 ntBASIC9.68□□□□□ -0.86
Col18a1P39061 Vmn1r41-205ENSMUST00000227630 827 ntBASIC9.68□□□□□ -0.86
Col18a1P39061 CT025525.2-201ENSMUST00000227743 423 ntBASIC9.68□□□□□ -0.86
Col18a1P39061 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col18a1P39061 Psg16-201ENSMUST00000071399 4421 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col18a1P39061 Ttc41-203ENSMUST00000217747 1949 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Col18a1P39061 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col18a1P39061 AC162301.1-201ENSMUST00000228785 1542 ntBASIC9.68□□□□□ -0.86
Col18a1P39061 Net1-202ENSMUST00000099946 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col18a1P39061 Adgrd1-203ENSMUST00000156437 4141 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col18a1P39061 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Col18a1P39061 Trub1-202ENSMUST00000026073 3795 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col18a1P39061 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Col18a1P39061 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Col18a1P39061 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col18a1P39061 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Col18a1P39061 Zfp472-201ENSMUST00000039132 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col18a1P39061 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col18a1P39061 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Col18a1P39061 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Col18a1P39061 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Col18a1P39061 Gm13352-201ENSMUST00000117515 262 ntBASIC9.68□□□□□ -0.86
Col18a1P39061 Gm25433-201ENSMUST00000158283 286 ntBASIC9.68□□□□□ -0.86
Col18a1P39061 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC9.68□□□□□ -0.86
Col18a1P39061 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Col18a1P39061 Gm43382-201ENSMUST00000198954 838 ntBASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms