Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
P20040 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
P20040 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
P20040 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
P20040 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
P20040 Gm6823-201ENSMUST00000120791 1839 ntBASIC6.58□□□□□ -1.36
P20040 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
P20040 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
P20040 Gm24462-201ENSMUST00000102430 106 ntBASIC6.58□□□□□ -1.36
P20040 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
P20040 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
P20040 Gm12344-201ENSMUST00000117087 329 ntBASIC6.58□□□□□ -1.36
P20040 Gm7803-201ENSMUST00000117176 1015 ntBASIC6.58□□□□□ -1.36
P20040 Gm13526-201ENSMUST00000117970 189 ntBASIC6.58□□□□□ -1.36
P20040 Gm13680-201ENSMUST00000119790 793 ntBASIC6.58□□□□□ -1.36
P20040 Gm42558-201ENSMUST00000200982 265 ntBASIC6.58□□□□□ -1.36
P20040 Gm19254-201ENSMUST00000204828 294 ntBASIC6.58□□□□□ -1.36
P20040 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC6.58□□□□□ -1.36
P20040 CT009556.3-201ENSMUST00000226173 513 ntBASIC6.58□□□□□ -1.36
P20040 AC154649.2-201ENSMUST00000228189 808 ntBASIC6.58□□□□□ -1.36
P20040 AC107453.3-201ENSMUST00000228205 639 ntBASIC6.58□□□□□ -1.36
P20040 Gm5815-201ENSMUST00000050706 1185 ntBASIC6.58□□□□□ -1.36
P20040 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
P20040 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
P20040 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
P20040 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
P20040 Mir484-201ENSMUST00000093566 67 ntBASIC6.58□□□□□ -1.36
P20040 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
P20040 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
P20040 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
P20040 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
P20040 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.58□□□□□ -1.36
P20040 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
P20040 Gm37786-201ENSMUST00000191714 3225 ntBASIC6.58□□□□□ -1.36
P20040 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
P20040 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
P20040 Gm45084-201ENSMUST00000207096 1957 ntBASIC6.58□□□□□ -1.36
P20040 Gm6729-201ENSMUST00000165173 1452 ntBASIC6.58□□□□□ -1.36
P20040 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
P20040 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
P20040 Gm42898-201ENSMUST00000200370 3073 ntBASIC6.58□□□□□ -1.36
P20040 Gm44021-201ENSMUST00000203055 3516 ntBASIC6.58□□□□□ -1.36
P20040 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC6.58□□□□□ -1.36
P20040 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
P20040 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
P20040 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
P20040 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC6.57□□□□□ -1.36
P20040 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
P20040 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
P20040 Rbms2-202ENSMUST00000099139 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
P20040 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
P20040 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
P20040 Gm43747-201ENSMUST00000201412 1330 ntBASIC6.57□□□□□ -1.36
P20040 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
P20040 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
P20040 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
P20040 Gm37618-201ENSMUST00000192891 3075 ntBASIC6.57□□□□□ -1.36
P20040 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
P20040 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
P20040 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
P20040 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
P20040 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
P20040 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
P20040 Gm16072-201ENSMUST00000119574 2377 ntBASIC6.57□□□□□ -1.36
P20040 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
P20040 Mir763-201ENSMUST00000103249 120 ntBASIC6.57□□□□□ -1.36
P20040 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
P20040 Gm24373-201ENSMUST00000104393 132 ntBASIC6.57□□□□□ -1.36
P20040 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC6.57□□□□□ -1.36
P20040 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC6.57□□□□□ -1.36
P20040 Gm13742-201ENSMUST00000118805 457 ntBASIC6.57□□□□□ -1.36
P20040 Gm11809-201ENSMUST00000120923 950 ntBASIC6.57□□□□□ -1.36
P20040 Gm13776-201ENSMUST00000122236 1261 ntBASIC6.57□□□□□ -1.36
P20040 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC6.57□□□□□ -1.36
P20040 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC6.57□□□□□ -1.36
P20040 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC6.57□□□□□ -1.36
P20040 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC6.57□□□□□ -1.36
P20040 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC6.57□□□□□ -1.36
P20040 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC6.57□□□□□ -1.36
P20040 Gm10012-202ENSMUST00000170379 372 ntBASIC6.57□□□□□ -1.36
P20040 Gm18709-201ENSMUST00000180564 489 ntBASIC6.57□□□□□ -1.36
P20040 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC6.57□□□□□ -1.36
P20040 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
P20040 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC6.57□□□□□ -1.36
P20040 Gm28239-201ENSMUST00000190225 447 ntBASIC6.57□□□□□ -1.36
P20040 Gm28341-201ENSMUST00000190883 472 ntBASIC6.57□□□□□ -1.36
P20040 Gm37469-201ENSMUST00000193728 890 ntBASIC6.57□□□□□ -1.36
P20040 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC6.57□□□□□ -1.36
P20040 Gm22149-202ENSMUST00000196259 137 ntBASIC6.57□□□□□ -1.36
P20040 Gm42161-201ENSMUST00000196278 726 ntTSL 5 BASIC6.57□□□□□ -1.36
P20040 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC6.57□□□□□ -1.36
P20040 Gm18131-201ENSMUST00000199241 449 ntBASIC6.57□□□□□ -1.36
P20040 Gm42696-201ENSMUST00000199859 1142 ntBASIC6.57□□□□□ -1.36
P20040 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC6.57□□□□□ -1.36
P20040 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC6.57□□□□□ -1.36
P20040 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
P20040 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
P20040 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
P20040 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
P20040 Gm17199-201ENSMUST00000097296 416 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms