Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Sdc1P18828 C87977-202ENSMUST00000105754 1407 ntAPPRIS ALT2 TSL 3 BASIC5.93□□□□□ -1.46
Sdc1P18828 Gm43187-201ENSMUST00000200652 2397 ntBASIC5.93□□□□□ -1.46
Sdc1P18828 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC5.93□□□□□ -1.46
Sdc1P18828 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC5.93□□□□□ -1.46
Sdc1P18828 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Sdc1P18828 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Sdc1P18828 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sdc1P18828 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Sdc1P18828 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Sdc1P18828 Gm44194-201ENSMUST00000204222 3229 ntBASIC5.93□□□□□ -1.46
Sdc1P18828 Ighv1-55-201ENSMUST00000103526 415 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Sdc1P18828 Gm23946-201ENSMUST00000104423 197 ntBASIC5.93□□□□□ -1.46
Sdc1P18828 Gm5752-201ENSMUST00000117771 594 ntBASIC5.93□□□□□ -1.46
Sdc1P18828 Rpsa-ps3-201ENSMUST00000117789 876 ntBASIC5.93□□□□□ -1.46
Sdc1P18828 Gm5255-201ENSMUST00000120125 642 ntBASIC5.93□□□□□ -1.46
Sdc1P18828 Rps14-203ENSMUST00000122279 667 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sdc1P18828 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sdc1P18828 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Sdc1P18828 A930019D19Rik-201ENSMUST00000135360 958 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sdc1P18828 Gm26351-201ENSMUST00000157532 232 ntBASIC5.93□□□□□ -1.46
Sdc1P18828 Gm24943-201ENSMUST00000158329 433 ntBASIC5.93□□□□□ -1.46
Sdc1P18828 Gm3611-201ENSMUST00000173687 877 ntBASIC5.93□□□□□ -1.46
Sdc1P18828 Gm27018-201ENSMUST00000181136 225 ntBASIC5.93□□□□□ -1.46
Sdc1P18828 Mir6909-201ENSMUST00000184212 62 ntBASIC5.93□□□□□ -1.46
Sdc1P18828 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC5.93□□□□□ -1.46
Sdc1P18828 Gm36991-201ENSMUST00000191800 648 ntBASIC5.93□□□□□ -1.46
Sdc1P18828 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC5.93□□□□□ -1.46
Sdc1P18828 Mir7230-201ENSMUST00000195977 56 ntBASIC5.93□□□□□ -1.46
Sdc1P18828 Gm42884-201ENSMUST00000200729 422 ntTSL 2 BASIC5.93□□□□□ -1.46
Sdc1P18828 Gm5291-201ENSMUST00000201965 899 ntBASIC5.93□□□□□ -1.46
Sdc1P18828 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC5.93□□□□□ -1.46
Sdc1P18828 1600020E01Rik-203ENSMUST00000204008 713 ntTSL 5 BASIC5.93□□□□□ -1.46
Sdc1P18828 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC5.93□□□□□ -1.46
Sdc1P18828 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC5.93□□□□□ -1.46
Sdc1P18828 AV026068-218ENSMUST00000223980 575 ntBASIC5.93□□□□□ -1.46
Sdc1P18828 Arl15-202ENSMUST00000224068 1002 ntBASIC5.93□□□□□ -1.46
Sdc1P18828 AC108416.3-201ENSMUST00000226148 557 ntBASIC5.93□□□□□ -1.46
Sdc1P18828 1700001C02Rik-201ENSMUST00000031078 731 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sdc1P18828 Gstm5-201ENSMUST00000004134 945 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sdc1P18828 n-R5s97-201ENSMUST00000082585 113 ntBASIC5.93□□□□□ -1.46
Sdc1P18828 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sdc1P18828 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sdc1P18828 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sdc1P18828 Glrx-204ENSMUST00000223120 1333 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Sdc1P18828 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sdc1P18828 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sdc1P18828 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC5.93□□□□□ -1.46
Sdc1P18828 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC5.93□□□□□ -1.46
Sdc1P18828 Gm46995-201ENSMUST00000223445 1378 ntBASIC5.93□□□□□ -1.46
Sdc1P18828 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sdc1P18828 Serpina3i-201ENSMUST00000109958 2200 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Sdc1P18828 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Sdc1P18828 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC5.92□□□□□ -1.46
Sdc1P18828 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sdc1P18828 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Sdc1P18828 Gm45832-201ENSMUST00000212762 1443 ntBASIC5.92□□□□□ -1.46
Sdc1P18828 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Sdc1P18828 Gm37033-201ENSMUST00000193199 7350 ntBASIC5.92□□□□□ -1.46
Sdc1P18828 AC122878.1-201ENSMUST00000227716 1460 ntBASIC5.92□□□□□ -1.46
Sdc1P18828 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sdc1P18828 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sdc1P18828 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sdc1P18828 Gm11605-201ENSMUST00000120413 646 ntBASIC5.92□□□□□ -1.46
Sdc1P18828 Lyzl1-202ENSMUST00000120837 652 ntTSL 3 BASIC5.92□□□□□ -1.46
Sdc1P18828 Gng5-ps-201ENSMUST00000120931 205 ntBASIC5.92□□□□□ -1.46
Sdc1P18828 Olfr330-201ENSMUST00000134055 1134 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Sdc1P18828 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sdc1P18828 Gm14487-201ENSMUST00000145413 1259 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sdc1P18828 Gm12996-201ENSMUST00000151670 636 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sdc1P18828 Gm25394-201ENSMUST00000157338 133 ntBASIC5.92□□□□□ -1.46
Sdc1P18828 Scarna17-201ENSMUST00000158064 79 ntBASIC5.92□□□□□ -1.46
Sdc1P18828 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC5.92□□□□□ -1.46
Sdc1P18828 Mir5623-201ENSMUST00000176631 70 ntBASIC5.92□□□□□ -1.46
Sdc1P18828 Gm24466-201ENSMUST00000179978 109 ntBASIC5.92□□□□□ -1.46
Sdc1P18828 Snhg7-201ENSMUST00000181621 139 ntBASIC5.92□□□□□ -1.46
Sdc1P18828 Gm17764-201ENSMUST00000185925 391 ntBASIC5.92□□□□□ -1.46
Sdc1P18828 Gm37295-201ENSMUST00000192186 109 ntBASIC5.92□□□□□ -1.46
Sdc1P18828 Gm36667-201ENSMUST00000196125 753 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sdc1P18828 Gm7384-201ENSMUST00000203682 530 ntBASIC5.92□□□□□ -1.46
Sdc1P18828 Gm6329-201ENSMUST00000209210 936 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sdc1P18828 Rps11-204ENSMUST00000211725 493 ntTSL 5 BASIC5.92□□□□□ -1.46
Sdc1P18828 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sdc1P18828 Gm18243-201ENSMUST00000220756 887 ntBASIC5.92□□□□□ -1.46
Sdc1P18828 AC156561.1-201ENSMUST00000224774 233 ntBASIC5.92□□□□□ -1.46
Sdc1P18828 AC121997.2-202ENSMUST00000227158 939 ntBASIC5.92□□□□□ -1.46
Sdc1P18828 AC154627.1-201ENSMUST00000228799 1286 ntBASIC5.92□□□□□ -1.46
Sdc1P18828 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Sdc1P18828 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sdc1P18828 BC048562-201ENSMUST00000057265 690 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sdc1P18828 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Sdc1P18828 n-R5s28-201ENSMUST00000082814 119 ntBASIC5.92□□□□□ -1.46
Sdc1P18828 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sdc1P18828 Paip1-202ENSMUST00000109203 1525 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
Sdc1P18828 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sdc1P18828 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sdc1P18828 Gm44121-201ENSMUST00000205169 2006 ntBASIC5.92□□□□□ -1.46
Sdc1P18828 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Sdc1P18828 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC5.92□□□□□ -1.46
Sdc1P18828 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms