Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm17195-201ENSMUST00000170289 428 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 Nip7-202ENSMUST00000170962 606 ntTSL 3 BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm17069-201ENSMUST00000172256 490 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm24080-201ENSMUST00000175178 232 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm27199-201ENSMUST00000185026 623 ntTSL 2 BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm29412-201ENSMUST00000185869 696 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 1700019D03Rik-204ENSMUST00000186266 623 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
Hoxd3P09027 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm29585-202ENSMUST00000187855 425 ntTSL 5 BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm29634-201ENSMUST00000188467 696 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm28699-201ENSMUST00000189193 696 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm28244-201ENSMUST00000189342 356 ntTSL 5 BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm4208-201ENSMUST00000189802 871 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm28837-201ENSMUST00000190397 696 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm5539-201ENSMUST00000192177 966 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm7496-201ENSMUST00000192573 1034 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm32921-201ENSMUST00000200592 810 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm7039-201ENSMUST00000205138 346 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm9367-201ENSMUST00000205703 546 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm45620-201ENSMUST00000209980 468 ntTSL 3 BASIC6.86□□□□□ -1.31
Hoxd3P09027 AC137127.2-201ENSMUST00000215086 935 ntTSL 5 BASIC6.86□□□□□ -1.31
Hoxd3P09027 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC6.86□□□□□ -1.31
Hoxd3P09027 AC165157.2-201ENSMUST00000222265 367 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 AC163651.1-201ENSMUST00000222500 372 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC6.86□□□□□ -1.31
Hoxd3P09027 AC192434.1-201ENSMUST00000225464 390 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 Tff3-201ENSMUST00000024827 493 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Il17f-201ENSMUST00000039046 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm5111-201ENSMUST00000064744 964 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm26063-201ENSMUST00000083378 107 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Hoxd3P09027 Spn-201ENSMUST00000049931 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Ces5a-201ENSMUST00000077816 1728 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Hoxd3P09027 Slc30a6-202ENSMUST00000179074 2171 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Itgb2l-201ENSMUST00000000161 2633 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm35808-201ENSMUST00000204769 2602 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 Pex5l-209ENSMUST00000193289 3526 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Eif2ak4-202ENSMUST00000102527 4906 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gria1-204ENSMUST00000151045 5361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Olfr1090-203ENSMUST00000217043 2054 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
Hoxd3P09027 Cd200-201ENSMUST00000023341 2085 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Hoxd3P09027 Mpp1-201ENSMUST00000033775 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Nipal4-201ENSMUST00000020679 3444 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Ppp1r12a-201ENSMUST00000070663 3403 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Prn-202ENSMUST00000136783 3370 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
Hoxd3P09027 CT009518.1-201ENSMUST00000224886 1571 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 Rnf19a-201ENSMUST00000022890 4277 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gna14-201ENSMUST00000025602 3383 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Trub1-202ENSMUST00000026073 3795 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Rnf11-202ENSMUST00000064167 1955 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gprc5c-202ENSMUST00000053361 3667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Olfr161-202ENSMUST00000216259 7133 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Hoxd3P09027 Tmem229b-204ENSMUST00000174072 3621 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Sec24c-201ENSMUST00000048657 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm11977-201ENSMUST00000118511 1461 ntBASIC6.85□□□□□ -1.31
Hoxd3P09027 Ighe-202ENSMUST00000223335 1460 ntAPPRIS P5 BASIC6.85□□□□□ -1.31
Hoxd3P09027 Zfp185-203ENSMUST00000164800 3557 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Mro-202ENSMUST00000120033 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Apol11b-202ENSMUST00000180949 2261 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Ndufs1-201ENSMUST00000027111 2661 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Gigyf2-217ENSMUST00000174501 3876 ntAPPRIS P3 TSL 5 BASIC6.85□□□□□ -1.31
Hoxd3P09027 6030443J06Rik-203ENSMUST00000181764 4299 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Gm33543-202ENSMUST00000210336 1428 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Hoxd3P09027 9630001P10Rik-202ENSMUST00000181335 3006 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
Hoxd3P09027 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC6.85□□□□□ -1.31
Hoxd3P09027 Gm43615-201ENSMUST00000197465 1773 ntBASIC6.85□□□□□ -1.31
Hoxd3P09027 Rai14-201ENSMUST00000090339 4909 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Dpep2-202ENSMUST00000117555 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Hoxd3P09027 Gm16485-201ENSMUST00000104915 3983 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Hoxd3P09027 Paqr8-201ENSMUST00000068880 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Dbndd2-203ENSMUST00000109349 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Mab21l3-201ENSMUST00000061831 3558 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Apex2-206ENSMUST00000112727 1663 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Mas1-204ENSMUST00000161747 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Mas1-208ENSMUST00000165020 1675 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Hoxd3P09027 Syt17-201ENSMUST00000081574 2764 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Gm26562-201ENSMUST00000181113 2010 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Gm21569-201ENSMUST00000222683 2036 ntBASIC6.85□□□□□ -1.31
Hoxd3P09027 Ckap2l-201ENSMUST00000052708 3137 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Snord116l9-201ENSMUST00000101891 94 ntBASIC6.85□□□□□ -1.31
Hoxd3P09027 Gm26504-201ENSMUST00000102033 94 ntBASIC6.85□□□□□ -1.31
Hoxd3P09027 Gm22771-201ENSMUST00000104449 91 ntBASIC6.85□□□□□ -1.31
Hoxd3P09027 S100a16-204ENSMUST00000107333 608 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
Hoxd3P09027 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Apod-202ENSMUST00000115230 1070 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Hoxd3P09027 Gm12046-201ENSMUST00000118536 331 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms