Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC7.11□□□□□ -1.27
Col6a3E9PWQ3 Gm13537-201ENSMUST00000120467 267 ntBASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm13282-201ENSMUST00000121577 545 ntBASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm16027-201ENSMUST00000161618 758 ntBASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm26800-201ENSMUST00000180871 349 ntTSL 3 BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm27409-201ENSMUST00000184727 80 ntBASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm4972-201ENSMUST00000211108 1254 ntBASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 3632451O06Rik-202ENSMUST00000118129 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Card11-201ENSMUST00000085786 4107 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Dhx8-201ENSMUST00000039152 4325 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm12388-201ENSMUST00000119112 1887 ntBASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm10650-202ENSMUST00000196581 1969 ntBASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Mir1193-201ENSMUST00000116761 121 ntBASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm14733-201ENSMUST00000117680 133 ntBASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm14881-201ENSMUST00000120366 372 ntBASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Mir1960-201ENSMUST00000157488 78 ntBASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm28934-201ENSMUST00000186491 346 ntBASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm13415-201ENSMUST00000131886 3089 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Mefv-201ENSMUST00000023180 3126 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm28670-201ENSMUST00000185365 1498 ntTSL 5 BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm29537-202ENSMUST00000186153 1498 ntTSL 5 BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm29497-201ENSMUST00000186801 1498 ntTSL 5 BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm28568-201ENSMUST00000187762 1498 ntTSL 5 BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm29445-202ENSMUST00000189947 1497 ntTSL 5 BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm28458-202ENSMUST00000190542 1497 ntTSL 5 BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm28457-202ENSMUST00000191277 1498 ntTSL 5 BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm37654-201ENSMUST00000193019 1498 ntTSL 5 BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm12634-201ENSMUST00000122157 992 ntBASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm11266-201ENSMUST00000139835 1271 ntTSL 2 BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm6808-201ENSMUST00000162341 807 ntBASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm19840-201ENSMUST00000169624 882 ntBASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm26509-201ENSMUST00000180947 948 ntBASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm44312-201ENSMUST00000203536 469 ntBASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Kalrn-204ENSMUST00000114949 3618 ntTSL 5 BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Tnfsf15-201ENSMUST00000062246 3347 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Cse1l-201ENSMUST00000002790 3641 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Sorbs1-212ENSMUST00000225148 2379 ntAPPRIS ALT2 BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Adgrl3-209ENSMUST00000119385 4905 ntTSL 5 BASIC7.1□□□□□ -1.27
Col6a3E9PWQ3 Gm45714-201ENSMUST00000211466 2722 ntBASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Srp72-201ENSMUST00000101087 3625 ntAPPRIS P2 TSL 2 BASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Arpp21-203ENSMUST00000111872 3316 ntTSL 5 BASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Arpp21-229ENSMUST00000164754 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Gm16221-201ENSMUST00000117331 393 ntBASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Gm12740-201ENSMUST00000118794 308 ntBASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Gm29519-201ENSMUST00000186994 398 ntBASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Gm8480-201ENSMUST00000190350 698 ntBASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Gm42759-201ENSMUST00000195915 2439 ntBASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC7.09□□□□□ -1.27
Col6a3E9PWQ3 Gm16335-201ENSMUST00000077495 309 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms