Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Meis1-201ENSMUST00000068264 3196 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Phf8-201ENSMUST00000046950 5728 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Morc2b-201ENSMUST00000053896 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Chd7-202ENSMUST00000051558 10216 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Erc1-203ENSMUST00000183703 8760 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Gm16276-201ENSMUST00000131218 262 ntBASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Gm37072-201ENSMUST00000194570 837 ntBASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Gm44896-201ENSMUST00000206190 772 ntBASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Gm7413-201ENSMUST00000219498 462 ntBASIC7.57□□□□□ -1.2
Col4a6B1AVK5 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Gm10126-201ENSMUST00000221732 168 ntBASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Gm2754-201ENSMUST00000223383 589 ntBASIC7.57□□□□□ -1.2
Col4a6B1AVK5 AC151730.1-201ENSMUST00000226106 448 ntBASIC7.57□□□□□ -1.2
Col4a6B1AVK5 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Sgsh-202ENSMUST00000100172 4223 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Gm37956-201ENSMUST00000195208 2010 ntBASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Gm2a-201ENSMUST00000000608 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 AY702103-202ENSMUST00000180996 5876 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Cmtr1-201ENSMUST00000024816 6380 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 P2ry4-201ENSMUST00000053373 4434 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Gm15681-201ENSMUST00000137501 2704 ntBASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Gm38331-201ENSMUST00000195719 2671 ntBASIC7.57□□□□□ -1.2
Col4a6B1AVK5 CT009757.4-201ENSMUST00000221520 2541 ntBASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Gm6679-201ENSMUST00000191467 1869 ntBASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Diaph1-203ENSMUST00000115629 5416 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Gm38262-201ENSMUST00000194760 1382 ntBASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Dlk1-206ENSMUST00000109846 4106 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Mir674-201ENSMUST00000102421 100 ntBASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Gm16073-201ENSMUST00000116032 517 ntBASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Gm15203-201ENSMUST00000117668 455 ntBASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Gm11445-201ENSMUST00000119101 532 ntBASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Gm11472-201ENSMUST00000121305 556 ntBASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Gm5871-201ENSMUST00000176461 718 ntBASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Gm19087-201ENSMUST00000191430 946 ntBASIC7.57□□□□□ -1.2
Col4a6B1AVK5 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Gm3800-201ENSMUST00000221086 554 ntBASIC7.57□□□□□ -1.2
Col4a6B1AVK5 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 AC124395.1-201ENSMUST00000225940 707 ntBASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Gm22684-201ENSMUST00000082849 132 ntBASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Arid1b-203ENSMUST00000115799 9888 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Pard3b-203ENSMUST00000094906 7676 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Celf1-203ENSMUST00000068747 7614 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col4a6B1AVK5 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col4a6B1AVK5 Gsdmc-202ENSMUST00000173503 2375 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Col4a6B1AVK5 Sdad1-203ENSMUST00000201143 2156 ntAPPRIS ALT1 TSL 5 BASIC7.56□□□□□ -1.2
Col4a6B1AVK5 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Col4a6B1AVK5 Tmem164-203ENSMUST00000112888 4221 ntTSL 3 BASIC7.56□□□□□ -1.2
Col4a6B1AVK5 Arfgef2-201ENSMUST00000099078 8770 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Col4a6B1AVK5 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Col4a6B1AVK5 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col4a6B1AVK5 Rbbp4-201ENSMUST00000102598 4407 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Col4a6B1AVK5 4833420G17Rik-203ENSMUST00000224312 3406 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Col4a6B1AVK5 Myom1-201ENSMUST00000024847 5354 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Col4a6B1AVK5 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Col4a6B1AVK5 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC7.56□□□□□ -1.2
Col4a6B1AVK5 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Col4a6B1AVK5 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col4a6B1AVK5 Peg13-201ENSMUST00000202826 4725 ntBASIC7.56□□□□□ -1.2
Col4a6B1AVK5 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Col4a6B1AVK5 Gm12959-201ENSMUST00000119396 403 ntBASIC7.56□□□□□ -1.2
Col4a6B1AVK5 Gm12844-201ENSMUST00000119463 582 ntBASIC7.56□□□□□ -1.2
Col4a6B1AVK5 Gm7189-201ENSMUST00000119811 429 ntBASIC7.56□□□□□ -1.2
Col4a6B1AVK5 Gm5406-201ENSMUST00000120054 766 ntBASIC7.56□□□□□ -1.2
Col4a6B1AVK5 Gm11553-201ENSMUST00000120682 240 ntBASIC7.56□□□□□ -1.2
Col4a6B1AVK5 Gm12369-201ENSMUST00000121343 942 ntBASIC7.56□□□□□ -1.2
Col4a6B1AVK5 Gm11434-201ENSMUST00000122379 629 ntBASIC7.56□□□□□ -1.2
Col4a6B1AVK5 Gm4660-201ENSMUST00000131499 403 ntBASIC7.56□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms