Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Gm45512-201ENSMUST00000210432 1553 ntBASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Gm9585-201ENSMUST00000219681 1404 ntBASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Gm6786-201ENSMUST00000203165 1915 ntBASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Gm25614-201ENSMUST00000104013 133 ntBASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Gm22470-201ENSMUST00000104117 130 ntBASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Gm15778-201ENSMUST00000118469 608 ntBASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Gm24923-201ENSMUST00000178201 88 ntBASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Gm26729-201ENSMUST00000180744 352 ntBASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Gm5272-201ENSMUST00000182730 982 ntBASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Gm38337-201ENSMUST00000193986 599 ntBASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Gm43387-201ENSMUST00000196896 1066 ntBASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Gm42696-201ENSMUST00000199859 1142 ntBASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Gm42734-201ENSMUST00000201656 878 ntBASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Gm45887-201ENSMUST00000212672 2998 ntBASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Upk3aQ9JKX8 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Sox6-206ENSMUST00000205405 2903 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Gm37984-201ENSMUST00000191641 3733 ntBASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Gm2108-201ENSMUST00000165058 2177 ntBASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Gm44916-201ENSMUST00000208664 2194 ntBASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Gm15576-201ENSMUST00000117806 583 ntBASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Gm12710-201ENSMUST00000119011 216 ntBASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Gm9697-201ENSMUST00000147052 997 ntBASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Gm27373-201ENSMUST00000184017 184 ntBASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Zfp572-202ENSMUST00000184208 1078 ntBASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Gm28894-201ENSMUST00000185214 615 ntBASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Gm9723-201ENSMUST00000192100 457 ntBASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Gm7341-201ENSMUST00000192183 926 ntBASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Gm6197-201ENSMUST00000192273 454 ntBASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Gm37369-201ENSMUST00000194179 615 ntBASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Gm45198-201ENSMUST00000206796 591 ntBASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Gm45782-201ENSMUST00000212670 366 ntBASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Gm46379-201ENSMUST00000222551 265 ntBASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 AC159205.2-201ENSMUST00000223759 816 ntBASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Gm37382-201ENSMUST00000193032 1596 ntBASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Upk3aQ9JKX8 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms